(43 nodes) Neuron projection terminus network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NRC4	MFS domain-containing protein. (584 aa)
	A0A158NRT0	Uncharacterized protein. (1046 aa)
	A0A158NRT8	SAC domain-containing protein. (1157 aa)
	A0A158NT25	Uncharacterized protein. (1744 aa)
	A0A158NTG4	NAD(P)-bd_dom domain-containing protein. (202 aa)
	A0A158NU36	WH1 domain-containing protein. (420 aa)
	A0A158NU91	Uncharacterized protein. (141 aa)
	A0A158NWA1	Uncharacterized protein. (292 aa)
	A0A158NWD7	Uncharacterized protein. (760 aa)
	A0A158N9A2	Uncharacterized protein. (2594 aa)
	A0A158NAU3	Uncharacterized protein. (190 aa)
	A0A158NBH7	UDENN domain-containing protein. (1976 aa)
	A0A158NC99	Uncharacterized protein. (758 aa)
	A0A158NCJ4	Uncharacterized protein. (221 aa)
	A0A158NCS4	Uncharacterized protein. (1618 aa)
	A0A158ND10	MFS domain-containing protein. (576 aa)
	A0A158NDK7	E3 ubiquitin-protein ligase. (872 aa)
	A0A158NDU0	Non-specific serine/threonine protein kinase. (1141 aa)
	A0A158NEN0	Uncharacterized protein. (3115 aa)
	A0A158NFU5	PUM-HD domain-containing protein. (1269 aa)
	A0A158NGB0	Protein kinase domain-containing protein. (622 aa)
	A0A158NHZ7	Uncharacterized protein. (771 aa)
	A0A158NIE8	ANK_REP_REGION domain-containing protein. (473 aa)
	A0A158NII9	ANK_REP_REGION domain-containing protein. (470 aa)
	A0A158NIK2	Uncharacterized protein. (214 aa)
	A0A158NJJ2	Chitin-binding type-2 domain-containing protein. (574 aa)
	A0A158NL20	Uncharacterized protein; Belongs to the MAGUK family. (602 aa)
	A0A158NNZ9	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (584 aa)
	A0A158NQF1	Uncharacterized protein. (339 aa)
	A0A158NQY9	Uncharacterized protein. (535 aa)
	A0A158NR57	Uncharacterized protein. (1275 aa)
	A0A158NX74	Synapsin_C domain-containing protein. (239 aa)
	A0A158NXE6	Peptidase_M13_N domain-containing protein. (382 aa)
	A0A158NY42	F-BAR domain-containing protein. (504 aa)
	A0A158NYQ9	MFS domain-containing protein. (682 aa)
	A0A158NZV9	Tyrosine-protein kinase receptor. (1506 aa)
	A0A158P037	Ig-like domain-containing protein. (680 aa)
	A0A158P0I7	Uncharacterized protein. (810 aa)
	A0A158P1M1	Uncharacterized protein. (317 aa)
	A0A158P244	Uncharacterized protein. (579 aa)
	A0A158P3G5	Uncharacterized protein; Belongs to the MAGUK family. (544 aa)
	A0A158NWF9	Uncharacterized protein. (186 aa)
	A0A158NWT4	Uncharacterized protein. (130 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158NCS4	A0A158NEN0	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A158NCS4	A0A158P3G5	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.976
A0A158NEN0	A0A158NCS4	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A158NEN0	A0A158NNZ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.867
A0A158NEN0	A0A158NRC4	Uncharacterized protein.	MFS domain-containing protein.	0.809
A0A158NEN0	A0A158NU91	Uncharacterized protein.	Uncharacterized protein.	0.758
A0A158NEN0	A0A158NX74	Uncharacterized protein.	Synapsin_C domain-containing protein.	0.554
A0A158NEN0	A0A158P1M1	Uncharacterized protein.	Uncharacterized protein.	0.554
A0A158NEN0	A0A158P3G5	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.925
A0A158NIE8	A0A158NII9	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.903
A0A158NII9	A0A158NIE8	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.903
A0A158NNZ9	A0A158NEN0	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.867
A0A158NNZ9	A0A158NRC4	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	MFS domain-containing protein.	0.732
A0A158NNZ9	A0A158NRT8	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	SAC domain-containing protein.	0.405
A0A158NNZ9	A0A158NU91	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.702
A0A158NNZ9	A0A158NWA1	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.608
A0A158NNZ9	A0A158NWF9	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.605
A0A158NNZ9	A0A158NX74	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Synapsin_C domain-containing protein.	0.646
A0A158NNZ9	A0A158P1M1	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.646
A0A158NNZ9	A0A158P3G5	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein; Belongs to the MAGUK family.	0.923