(24 nodes) Pole plasm network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158ND11	Importin N-terminal domain-containing protein. (890 aa)
	A0A158NPA5	Uncharacterized protein. (2576 aa)
	A0A158NP28	Uncharacterized protein; Belongs to the DEAD box helicase family. (423 aa)
	A0A158NMV1	Rap-GAP domain-containing protein. (921 aa)
	A0A158NKJ4	Uncharacterized protein. (502 aa)
	A0A158NIN0	Uncharacterized protein. (402 aa)
	A0A158NI03	Uncharacterized protein. (1209 aa)
	A0A158NH30	Uncharacterized protein. (1465 aa)
	A0A158NG10	Uncharacterized protein. (1243 aa)
	A0A158NDG9	Uncharacterized protein. (960 aa)
	A0A158ND26	Uncharacterized protein. (461 aa)
	A0A158NBD4	Uncharacterized protein. (1490 aa)
	A0A158P3Z4	UBR-type domain-containing protein. (5293 aa)
	A0A158P2P0	Uncharacterized protein. (464 aa)
	A0A158P2I4	Uncharacterized protein. (350 aa)
	A0A158P239	Uncharacterized protein. (1106 aa)
	A0A158P1R9	Uncharacterized protein; Belongs to the argonaute family. (908 aa)
	A0A158P1M6	Uncharacterized protein. (159 aa)
	A0A158P0V8	Nudix hydrolase domain-containing protein. (460 aa)
	A0A158P007	Nanos-type domain-containing protein; Belongs to the nanos family. (170 aa)
	A0A158NZ40	Uncharacterized protein. (1335 aa)
	A0A158NYL1	Peptidylprolyl isomerase. (445 aa)
	A0A158NVN2	Uncharacterized protein; Belongs to the DEAD box helicase family. (694 aa)
	A0A158NT75	PLD phosphodiesterase domain-containing protein. (226 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158NBD4	A0A158NT75	Uncharacterized protein.	PLD phosphodiesterase domain-containing protein.	0.440
A0A158NBD4	A0A158NYL1	Uncharacterized protein.	Peptidylprolyl isomerase.	0.452
A0A158NBD4	A0A158P1R9	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.406
A0A158NDG9	A0A158NG10	Uncharacterized protein.	Uncharacterized protein.	0.665
A0A158NDG9	A0A158NI03	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A158NDG9	A0A158NKJ4	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A158NDG9	A0A158NT75	Uncharacterized protein.	PLD phosphodiesterase domain-containing protein.	0.602
A0A158NDG9	A0A158NYL1	Uncharacterized protein.	Peptidylprolyl isomerase.	0.637
A0A158NDG9	A0A158NZ40	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A158NDG9	A0A158P1R9	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.453
A0A158NG10	A0A158NDG9	Uncharacterized protein.	Uncharacterized protein.	0.665
A0A158NG10	A0A158NH30	Uncharacterized protein.	Uncharacterized protein.	0.421
A0A158NG10	A0A158NI03	Uncharacterized protein.	Uncharacterized protein.	0.428
A0A158NG10	A0A158NKJ4	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A158NG10	A0A158NPA5	Uncharacterized protein.	Uncharacterized protein.	0.460
A0A158NG10	A0A158NT75	Uncharacterized protein.	PLD phosphodiesterase domain-containing protein.	0.460
A0A158NG10	A0A158NYL1	Uncharacterized protein.	Peptidylprolyl isomerase.	0.581
A0A158NG10	A0A158NZ40	Uncharacterized protein.	Uncharacterized protein.	0.428
A0A158NG10	A0A158P1R9	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.581
A0A158NH30	A0A158NG10	Uncharacterized protein.	Uncharacterized protein.	0.421