(14 nodes) ENTH/VHS network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158P1C6	CID domain-containing protein. (336 aa)
	A0A158N9H9	Uncharacterized protein. (960 aa)
	A0A158ND81	CID domain-containing protein. (1273 aa)
	A0A158NDC3	Uncharacterized protein. (517 aa)
	A0A158NH91	Uncharacterized protein. (901 aa)
	A0A158NJF6	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. (836 aa)
	A0A158NJL4	ENTH domain-containing protein. (1441 aa)
	A0A158NKM9	Uncharacterized protein. (1591 aa)
	A0A158NKY6	ENTH domain-containing protein. (929 aa)
	A0A158NSV5	Uncharacterized protein. (792 aa)
	A0A158NT64	Uncharacterized protein. (539 aa)
	A0A158NTQ8	ENTH domain-containing protein. (586 aa)
	A0A158NZL1	CID domain-containing protein. (1893 aa)
	A0A158P2T2	Uncharacterized protein. (669 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158N9H9	A0A158NKY6	Uncharacterized protein.	ENTH domain-containing protein.	0.882
A0A158N9H9	A0A158NTQ8	Uncharacterized protein.	ENTH domain-containing protein.	0.894
A0A158ND81	A0A158NZL1	CID domain-containing protein.	CID domain-containing protein.	0.800
A0A158ND81	A0A158P1C6	CID domain-containing protein.	CID domain-containing protein.	0.654
A0A158NH91	A0A158NSV5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A158NJF6	A0A158NT64	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.	Uncharacterized protein.	0.999
A0A158NJF6	A0A158NTQ8	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.	ENTH domain-containing protein.	0.768
A0A158NJL4	A0A158NKY6	ENTH domain-containing protein.	ENTH domain-containing protein.	0.601
A0A158NKM9	A0A158NZL1	Uncharacterized protein.	CID domain-containing protein.	0.717
A0A158NKM9	A0A158P1C6	Uncharacterized protein.	CID domain-containing protein.	0.471
A0A158NKY6	A0A158N9H9	ENTH domain-containing protein.	Uncharacterized protein.	0.882
A0A158NKY6	A0A158NJL4	ENTH domain-containing protein.	ENTH domain-containing protein.	0.601
A0A158NKY6	A0A158NT64	ENTH domain-containing protein.	Uncharacterized protein.	0.637
A0A158NKY6	A0A158NTQ8	ENTH domain-containing protein.	ENTH domain-containing protein.	0.863
A0A158NSV5	A0A158NH91	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A158NT64	A0A158NJF6	Uncharacterized protein.	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.	0.999
A0A158NT64	A0A158NKY6	Uncharacterized protein.	ENTH domain-containing protein.	0.637
A0A158NT64	A0A158NTQ8	Uncharacterized protein.	ENTH domain-containing protein.	0.689
A0A158NTQ8	A0A158N9H9	ENTH domain-containing protein.	Uncharacterized protein.	0.894
A0A158NTQ8	A0A158NJF6	ENTH domain-containing protein.	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.	0.768