(6 nodes) Zinc-binding ribosomal protein network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NGP0	Uncharacterized protein. (195 aa)
	A0A158NTC7	Ubiquitin-like domain-containing protein. (156 aa)
	A0A158NXV0	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (107 aa)
	A0A158NDC7	Uncharacterized protein. (64 aa)
	A0A158N929	Ribosomal protein L37; Binds to the 23S rRNA. (91 aa)
	A0A158NQJ7	Uncharacterized protein. (92 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158N929	A0A158NDC7	Ribosomal protein L37; Binds to the 23S rRNA.	Uncharacterized protein.	0.507
A0A158N929	A0A158NQJ7	Ribosomal protein L37; Binds to the 23S rRNA.	Uncharacterized protein.	0.999
A0A158N929	A0A158NTC7	Ribosomal protein L37; Binds to the 23S rRNA.	Ubiquitin-like domain-containing protein.	0.999
A0A158N929	A0A158NXV0	Ribosomal protein L37; Binds to the 23S rRNA.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A158NDC7	A0A158N929	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.507
A0A158NDC7	A0A158NQJ7	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A158NQJ7	A0A158N929	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
A0A158NQJ7	A0A158NDC7	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A158NQJ7	A0A158NTC7	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.999
A0A158NQJ7	A0A158NXV0	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A158NTC7	A0A158N929	Ubiquitin-like domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
A0A158NTC7	A0A158NQJ7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.999
A0A158NTC7	A0A158NXV0	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A158NXV0	A0A158N929	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
A0A158NXV0	A0A158NQJ7	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein.	0.999
A0A158NXV0	A0A158NTC7	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Ubiquitin-like domain-containing protein.	0.999