(6 nodes) Formin, FH2 domain superfamily network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NL62	Uncharacterized protein. (1756 aa)
	A0A158P2P1	Uncharacterized protein. (2783 aa)
	A0A158NYK4	FH2 domain-containing protein. (1296 aa)
	A0A158NU55	Uncharacterized protein. (1084 aa)
	A0A158NNE7	Uncharacterized protein. (1043 aa)
	A0A158NIU2	Uncharacterized protein. (1087 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158NIU2	A0A158NNE7	Uncharacterized protein.	Uncharacterized protein.	0.639
A0A158NIU2	A0A158NU55	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A158NL62	A0A158NNE7	Uncharacterized protein.	Uncharacterized protein.	0.639
A0A158NL62	A0A158NU55	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A158NNE7	A0A158NIU2	Uncharacterized protein.	Uncharacterized protein.	0.639
A0A158NNE7	A0A158NL62	Uncharacterized protein.	Uncharacterized protein.	0.639
A0A158NNE7	A0A158NU55	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A158NNE7	A0A158NYK4	Uncharacterized protein.	FH2 domain-containing protein.	0.512
A0A158NU55	A0A158NIU2	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A158NU55	A0A158NL62	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A158NU55	A0A158NNE7	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A158NYK4	A0A158NNE7	FH2 domain-containing protein.	Uncharacterized protein.	0.512