27 items (Atta cephalotes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NXC8	Uncharacterized protein; Belongs to the tropomyosin family. (204 aa)
	A0A158NYK4	FH2 domain-containing protein. (1296 aa)
	A0A158NZ71	Uncharacterized protein. (8527 aa)
	A0A158NZG3	CYTOSOL_AP domain-containing protein. (512 aa)
	A0A158P1D4	Uncharacterized protein. (914 aa)
	A0A158P3E8	Uncharacterized protein. (990 aa)
	A0A158NF85	Uncharacterized protein. (284 aa)
	A0A158NF92	Uncharacterized protein. (325 aa)
	A0A158NGS2	Spectrin beta chain; Belongs to the spectrin family. (2400 aa)
	A0A158NIL3	Uncharacterized protein. (2433 aa)
	A0A158NJ55	USP domain-containing protein; Belongs to the peptidase C19 family. (2590 aa)
	A0A158NJN6	Uncharacterized protein. (1217 aa)
	A0A158NKD5	Uncharacterized protein. (1193 aa)
	A0A158NMJ1	Uncharacterized protein. (239 aa)
	A0A158NMV2	Uncharacterized protein. (1963 aa)
	A0A158NMV6	Uncharacterized protein. (523 aa)
	A0A158NPU5	WD_REPEATS_REGION domain-containing protein. (1072 aa)
	A0A158NRW3	Non-specific serine/threonine protein kinase. (672 aa)
	A0A158NF83	Uncharacterized protein. (284 aa)
	A0A158NRZ0	Uncharacterized protein. (1025 aa)
	A0A158NSB6	Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
	A0A158NSN3	Uncharacterized protein. (674 aa)
	A0A158NWB0	Uncharacterized protein. (392 aa)
	A0A158NWF6	Non-specific serine/threonine protein kinase. (524 aa)
	A0A158NBJ3	Uncharacterized protein. (915 aa)
	A0A158NBM2	Vang-like protein. (573 aa)
	A0A158NC70	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1676 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158NBM2	A0A158NF92	Vang-like protein.	Uncharacterized protein.	0.522
A0A158NBM2	A0A158NJN6	Vang-like protein.	Uncharacterized protein.	0.511
A0A158NBM2	A0A158NMV2	Vang-like protein.	Uncharacterized protein.	0.729
A0A158NBM2	A0A158NRZ0	Vang-like protein.	Uncharacterized protein.	0.520
A0A158NBM2	A0A158NWB0	Vang-like protein.	Uncharacterized protein.	0.500
A0A158NBM2	A0A158NYK4	Vang-like protein.	FH2 domain-containing protein.	0.465
A0A158NC70	A0A158NIL3	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.547
A0A158NC70	A0A158NJ55	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.424
A0A158NC70	A0A158NJN6	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.510
A0A158NC70	A0A158NMJ1	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.642
A0A158NC70	A0A158NMV2	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.440
A0A158NC70	A0A158NMV6	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.724
A0A158NC70	A0A158NRW3	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Non-specific serine/threonine protein kinase.	0.446
A0A158NC70	A0A158NRZ0	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.479
A0A158NC70	A0A158NSN3	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.494
A0A158NC70	A0A158NWB0	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.491
A0A158NC70	A0A158NWF6	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Non-specific serine/threonine protein kinase.	0.453
A0A158NC70	A0A158NZ71	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.574
A0A158NC70	A0A158P3E8	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.521
A0A158NF92	A0A158NBM2	Uncharacterized protein.	Vang-like protein.	0.522