(3 nodes) 60s Acidic ribosomal protein network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NKQ4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
	A0A158NC71	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	A0A158NU13	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158NC71	A0A158NKQ4	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.992
A0A158NC71	A0A158NU13	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
A0A158NKQ4	A0A158NC71	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.992
A0A158NKQ4	A0A158NU13	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
A0A158NU13	A0A158NC71	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
A0A158NU13	A0A158NKQ4	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999