(60 nodes) Leucine-rich repeats, typical (most populated) subfamily network (Atta cephalotes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A158NMQ5	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (1607 aa)
	A0A158NN92	Uncharacterized protein. (950 aa)
	A0A158NRR9	Uncharacterized protein. (616 aa)
	A0A158NSY5	Ig-like domain-containing protein. (759 aa)
	A0A158NT23	Uncharacterized protein. (2486 aa)
	A0A158NTA0	Uncharacterized protein. (872 aa)
	A0A158NTA2	Uncharacterized protein. (784 aa)
	A0A158NU41	LRRCT domain-containing protein. (708 aa)
	A0A158NUS9	G_PROTEIN_RECEP_F1_2 domain-containing protein. (1025 aa)
	A0A158N8V7	LRRCT domain-containing protein. (1493 aa)
	A0A158NUU3	Uncharacterized protein. (1479 aa)
	A0A158NV56	Uncharacterized protein. (1273 aa)
	A0A158NWS6	B3_4 domain-containing protein. (526 aa)
	A0A158NX36	Uncharacterized protein. (190 aa)
	A0A158NXN6	Ig-like domain-containing protein. (638 aa)
	A0A158NXV2	Uncharacterized protein. (315 aa)
	A0A158NXZ5	Uncharacterized protein. (418 aa)
	A0A158NYH4	LRRCT domain-containing protein. (920 aa)
	A0A158NZC4	Uncharacterized protein. (534 aa)
	A0A158NZT8	Uncharacterized protein. (1241 aa)
	A0A158P0D7	Uncharacterized protein. (563 aa)
	A0A158P0I1	TIR domain-containing protein. (1461 aa)
	A0A158P1F6	Ig-like domain-containing protein. (913 aa)
	A0A158P1H3	Uncharacterized protein. (337 aa)
	A0A158P1H7	Uncharacterized protein. (495 aa)
	A0A158P2K6	PPM-type phosphatase domain-containing protein. (1846 aa)
	A0A158P3E5	LRRCT domain-containing protein. (1069 aa)
	A0A158P3M6	TIR domain-containing protein; Belongs to the Toll-like receptor family. (1078 aa)
	A0A158P3Z6	Uncharacterized protein. (643 aa)
	A0A158P3Z7	Uncharacterized protein. (695 aa)
	A0A158P401	Uncharacterized protein. (410 aa)
	A0A158N922	Uncharacterized protein. (310 aa)
	A0A158N9E5	Ig-like domain-containing protein. (756 aa)
	A0A158N9J9	Uncharacterized protein. (401 aa)
	A0A158NAD2	Uncharacterized protein. (629 aa)
	A0A158NAL3	Uncharacterized protein. (344 aa)
	A0A158NBB1	Uncharacterized protein. (477 aa)
	A0A158NBB2	Uncharacterized protein. (370 aa)
	A0A158NBN2	Uncharacterized protein. (952 aa)
	A0A158NCD3	Uncharacterized protein. (603 aa)
	A0A158NCN5	Uncharacterized protein. (1433 aa)
	A0A158NDI2	Uncharacterized protein. (1271 aa)
	A0A158NDQ3	Calponin-homology (CH) domain-containing protein. (753 aa)
	A0A158NDY6	Fibronectin type-III domain-containing protein. (1412 aa)
	A0A158NEJ6	Fibronectin type-III domain-containing protein. (1433 aa)
	A0A158NEN9	Uncharacterized protein. (644 aa)
	A0A158NG05	Uncharacterized protein. (615 aa)
	A0A158NG42	Uncharacterized protein. (284 aa)
	A0A158NGC4	Uncharacterized protein. (203 aa)
	A0A158NGT1	Uncharacterized protein. (643 aa)
	A0A158NH03	Uncharacterized protein. (406 aa)
	A0A158NHH8	Uncharacterized protein. (491 aa)
	A0A158NHK6	TIR domain-containing protein. (1243 aa)
	A0A158NHL8	TIR domain-containing protein; Belongs to the Toll-like receptor family. (1226 aa)
	A0A158NHZ4	TIR domain-containing protein. (1328 aa)
	A0A158NJP2	Uncharacterized protein. (650 aa)
	A0A158NJR7	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (773 aa)
	A0A158NJZ3	Uncharacterized protein. (890 aa)
	A0A158NLR7	LRRCT domain-containing protein. (1234 aa)
	A0A158NMJ6	Uncharacterized protein. (981 aa)

Your Current Organism:

Atta cephalotes

NCBI taxonomy Id: 12957
Other names: A. cephalotes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A158NAD2	A0A158NH03	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A158NAD2	A0A158NHH8	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A158NAD2	A0A158NX36	Uncharacterized protein.	Uncharacterized protein.	0.404
A0A158NAD2	A0A158NXZ5	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A158NAL3	A0A158NDQ3	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.450
A0A158NAL3	A0A158NG42	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A158NAL3	A0A158NGC4	Uncharacterized protein.	Uncharacterized protein.	0.477
A0A158NAL3	A0A158NH03	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A158NAL3	A0A158NHH8	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A158NAL3	A0A158NX36	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A158NAL3	A0A158NXZ5	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A158NBB1	A0A158NGC4	Uncharacterized protein.	Uncharacterized protein.	0.404
A0A158NBB1	A0A158NH03	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A158NBB1	A0A158NHH8	Uncharacterized protein.	Uncharacterized protein.	0.431
A0A158NBB1	A0A158NTA2	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A158NBB1	A0A158NXZ5	Uncharacterized protein.	Uncharacterized protein.	0.466
A0A158NBB2	A0A158NEN9	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A158NBB2	A0A158NH03	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A158NBB2	A0A158NHH8	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A158NBB2	A0A158NXZ5	Uncharacterized protein.	Uncharacterized protein.	0.412