STRINGSTRING
I302_04224 I302_04224 I302_03508 I302_03508 I302_05412 I302_05412 I302_05399 I302_05399 I302_05248 I302_05248 I302_05127 I302_05127 I302_04914 I302_04914 I302_04912 I302_04912 I302_04862 I302_04862 I302_06159 I302_06159 I302_06133 I302_06133 I302_06075 I302_06075 I302_06063 I302_06063 I302_05915 I302_05915 I302_05843 I302_05843 I302_05772 I302_05772 I302_05777 I302_05777 I302_05704 I302_05704 I302_05595 I302_05595 I302_07038 I302_07038 I302_06917 I302_06917 I302_06906 I302_06906 I302_06693 I302_06693 I302_06659 I302_06659 I302_06564 I302_06564 I302_06388 I302_06388 I302_07545 I302_07545 I302_07438 I302_07438 I302_07267 I302_07267 I302_07257 I302_07257 I302_07231 I302_07231 I302_07206 I302_07206 I302_07133 I302_07133 I302_07109 I302_07109 I302_08242 I302_08242 I302_08078 I302_08078 I302_08035 I302_08035 I302_07990 I302_07990 I302_07877 I302_07877 I302_07763 I302_07763 I302_08703 I302_08703 I302_08433 I302_08433 I302_08392 I302_08392 I302_08376 I302_08376 I302_09254 I302_09254 I302_09022 I302_09022 I302_08854 I302_08854 I302_01660 I302_01660 I302_01600 I302_01600 I302_01398 I302_01398 I302_01337 I302_01337 I302_01171 I302_01171 I302_00947 I302_00947 I302_00744 I302_00744 I302_00684 I302_00684 I302_00618 I302_00618 I302_00414 I302_00414 I302_00410 I302_00410 I302_00404 I302_00404 I302_00230 I302_00230 I302_00211 I302_00211 I302_00208 I302_00208 I302_00113 I302_00113 I302_00053 I302_00053 I302_03271 I302_03271 I302_03045 I302_03045 I302_02783 I302_02783 I302_02631 I302_02631 I302_02567 I302_02567 I302_02229 I302_02229 I302_04395 I302_04395 I302_04230 I302_04230
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I302_04224DNA-directed RNA polymerase I, II, and III subunit RPABC4. (84 aa)
I302_03508COP9 signalosome complex subunit 5. (363 aa)
I302_05412DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
I302_05399Transcription initiation factor TFIIH subunit 1. (650 aa)
I302_05248DNA polymerase kappa subunit. (628 aa)
I302_05127DNA excision repair protein ERCC-5. (1316 aa)
I302_04914USP domain-containing protein; Belongs to the peptidase C19 family. (1513 aa)
I302_04912AAA domain-containing protein. (1021 aa)
I302_04862Cyclophilin. (166 aa)
I302_06159COP9 signalosome complex subunit 2. (474 aa)
I302_06133Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (612 aa)
I302_06075DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1244 aa)
I302_06063Polyubiquitin. (160 aa)
I302_05915Uncharacterized protein. (334 aa)
I302_05843Replication factor A2. (256 aa)
I302_05772Uncharacterized protein. (233 aa)
I302_05777CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (360 aa)
I302_05704RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (491 aa)
I302_05595Replication factor C subunit 3/5. (378 aa)
I302_07038UDP-galactopyranose mutase. (528 aa)
I302_06917DNA repair protein. (325 aa)
I302_06906TFIIS central domain-containing protein. (830 aa)
I302_06693Replication factor C subunit 2/4. (349 aa)
I302_06659Uncharacterized protein. (239 aa)
I302_06564DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1800 aa)
I302_06388DNA-directed RNA polymerase II subunit RPB3. (389 aa)
I302_07545PCI domain-containing protein. (299 aa)
I302_07438DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
I302_07267Uncharacterized protein. (119 aa)
I302_07257Cyclin H; Belongs to the cyclin family. (452 aa)
I302_07231General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (447 aa)
I302_07206CBFD_NFYB_HMF domain-containing protein. (347 aa)
I302_07133CULLIN_2 domain-containing protein; Belongs to the cullin family. (809 aa)
I302_07109COP9 signalosome complex subunit 4. (467 aa)
I302_08242Uncharacterized protein. (276 aa)
I302_08078CPSF_A domain-containing protein. (1305 aa)
I302_08035DNA-directed RNA polymerase I, II, and III subunit RPABC2. (176 aa)
I302_07990DNA_LIGASE_A3 domain-containing protein. (945 aa)
I302_07877Pre-mRNA-splicing factor SYF1. (1028 aa)
I302_07763PCI domain-containing protein. (535 aa)
I302_08703DNA-directed RNA polymerase I, II, and III subunit rpabc5. (69 aa)
I302_08433DNA-directed RNA polymerase II subunit RPB11. (160 aa)
I302_08392RING-box protein 1. (111 aa)
I302_08376Replication factor A3. (108 aa)
I302_09254Chromo domain-containing protein. (779 aa)
I302_09022Replication factor C subunit 3/5. (341 aa)
I302_08854CCHC-type domain-containing protein. (329 aa)
I302_01660DNA-directed RNA polymerase I, II, and III subunit RPABC1. (200 aa)
I302_01600DNA excision repair protein ERCC-3. (876 aa)
I302_01398DNA-directed RNA polymerase II subunit RPB4. (159 aa)
I302_01337Uncharacterized protein. (433 aa)
I302_01171Uncharacterized protein. (472 aa)
I302_00947Replication factor C subunit 2/4. (364 aa)
I302_00744Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1080 aa)
I302_00684DNA excision repair protein ERCC-2. (811 aa)
I302_00618Uncharacterized protein. (510 aa)
I302_00414Uncharacterized protein. (527 aa)
I302_00410Uncharacterized protein. (192 aa)
I302_00404DNA excision repair protein ERCC-4. (1128 aa)
I302_00230CDK-activating kinase assembly factor MAT1. (373 aa)
I302_00211Transcription elongation factor S-II. (336 aa)
I302_00208DNA excision repair protein ERCC-1. (377 aa)
I302_00113Peptidyl-prolyl cis-trans isomerase D. (373 aa)
I302_00053Zds_C domain-containing protein. (1105 aa)
I302_03271Uncharacterized protein. (1209 aa)
I302_03045Pre-mRNA-processing factor 19. (508 aa)
I302_02783CIA30 domain-containing protein. (259 aa)
I302_02631Replication factor C subunit 1. (1038 aa)
I302_02567PPIase cyclophilin-type domain-containing protein. (444 aa)
I302_02229Polyubiquitin. (381 aa)
I302_04395COP9 signalosome complex subunit 6. (354 aa)
I302_04230DNA-directed RNA polymerase II subunit RPB7. (172 aa)
Your Current Organism:
Kwoniella bestiolae
NCBI taxonomy Id: 1296100
Other names: Cryptococcus bestiolae CBS 10118, Cryptococcus bestiolae CBS10118, K. bestiolae CBS 10118, Kwoniella bestiolae CBS 10118
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