25 items (Kwoniella dejecticola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I303_00837	Cell division control protein 42. (191 aa)
	I303_08510	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (688 aa)
	I303_07603	Rho family protein. (201 aa)
	I303_06965	Uncharacterized protein. (766 aa)
	I303_07436	GTPase activating protein. (1145 aa)
	I303_06687	Uncharacterized protein; Belongs to the DOCK family. (2332 aa)
	I303_01136	Rho family protein. (198 aa)
	I303_06874	Rho family protein. (210 aa)
	I303_06905	BRCA1-associated protein. (733 aa)
	I303_05698	Uncharacterized protein. (1459 aa)
	I303_05988	GTP-binding protein rhoA. (185 aa)
	I303_05989	Rho GDP-dissociation inhibitor. (199 aa)
	I303_06304	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (452 aa)
	I303_04263	Ras-like protein. (216 aa)
	I303_04600	Uncharacterized protein. (965 aa)
	I303_01001	Uncharacterized protein. (1411 aa)
	I303_03589	Ras family, other. (337 aa)
	I303_02692	Uncharacterized protein. (308 aa)
	I303_02718	Uncharacterized protein. (198 aa)
	I303_02857	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (545 aa)
	I303_02961	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (809 aa)
	I303_01588	Rho family protein. (205 aa)
	I303_01700	Ras family, other. (211 aa)
	I303_02306	Rho family protein. (225 aa)
	I303_00533	Adenylyl cyclase-associated protein; Belongs to the CAP family. (519 aa)

Your Current Organism:

Kwoniella dejecticola

NCBI taxonomy Id: 1296121
Other names: Cryptococcus dejecticola CBS 10117, K. dejecticola CBS 10117, Kwoniella dejecticola CBS 10117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I303_00533	I303_06304	A0A1A6AF81	A0A1A6A1T5	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.433
I303_00837	I303_01001	A0A1A6AG18	A0A1A6AGP3	Cell division control protein 42.	Uncharacterized protein.	0.745
I303_00837	I303_01136	A0A1A6AG18	A0A1A6AGV6	Cell division control protein 42.	Rho family protein.	0.481
I303_00837	I303_01588	A0A1A6AG18	A0A1A6ABF0	Cell division control protein 42.	Rho family protein.	0.747
I303_00837	I303_01700	A0A1A6AG18	A0A1A6ABQ7	Cell division control protein 42.	Ras family, other.	0.742
I303_00837	I303_02306	A0A1A6AG18	A0A1A6ADE5	Cell division control protein 42.	Rho family protein.	0.746
I303_00837	I303_02718	A0A1A6AG18	A0A1A6A9H6	Cell division control protein 42.	Uncharacterized protein.	0.748
I303_00837	I303_02857	A0A1A6AG18	A0A1A6A9V7	Cell division control protein 42.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.658
I303_00837	I303_03589	A0A1A6AG18	A0A1A6A738	Cell division control protein 42.	Ras family, other.	0.605
I303_00837	I303_04263	A0A1A6AG18	A0A1A6A4H1	Cell division control protein 42.	Ras-like protein.	0.742
I303_00837	I303_04600	A0A1A6AG18	A0A1A6A5D2	Cell division control protein 42.	Uncharacterized protein.	0.668
I303_00837	I303_05698	A0A1A6AG18	A0A1A6A042	Cell division control protein 42.	Uncharacterized protein.	0.745
I303_00837	I303_05988	A0A1A6AG18	A0A1A6A0X8	Cell division control protein 42.	GTP-binding protein rhoA.	0.741
I303_00837	I303_05989	A0A1A6AG18	A0A1A6A0X9	Cell division control protein 42.	Rho GDP-dissociation inhibitor.	0.945
I303_00837	I303_06304	A0A1A6AG18	A0A1A6A1T5	Cell division control protein 42.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.692
I303_00837	I303_06687	A0A1A6AG18	A0A1A5ZZ86	Cell division control protein 42.	Uncharacterized protein; Belongs to the DOCK family.	0.897
I303_00837	I303_06874	A0A1A6AG18	A0A1A5ZZS3	Cell division control protein 42.	Rho family protein.	0.743
I303_00837	I303_06905	A0A1A6AG18	A0A1A5ZZU6	Cell division control protein 42.	BRCA1-associated protein.	0.549
I303_00837	I303_07436	A0A1A6AG18	A0A1A5ZXY3	Cell division control protein 42.	GTPase activating protein.	0.413
I303_00837	I303_07603	A0A1A6AG18	A0A1A5ZV60	Cell division control protein 42.	Rho family protein.	0.480