(31 nodes) Flavin adenine dinucleotide binding network (Intestinimonas butyriciproducens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALP92590.1	Hypothetical protein. (99 aa)
	ALP92679.1	4-hydroxybutanoyl-CoA dehydratase. (464 aa)
	ALP92844.1	Butyryl-CoA dehydrogenase. (67 aa)
	ALP92979.1	tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (323 aa)
	ALP93076.1	Acetolactate synthase large subunit. (569 aa)
	ALP93230.1	Hemolysin; Proteins containing CBS domains. (316 aa)
	ALP93270.1	Hemolysin; Proteins containing CBS domains. (441 aa)
	ALP93302.1	Butyryl-CoA dehydrogenase. (379 aa)
	ALP93530.1	Putative transcriptional regulator; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (323 aa)
	ALP93541.1	Dihydrolipoamide dehydrogenase. (460 aa)
	ALP93791.1	Butyryl-CoA dehydrogenase. (381 aa)
	murB	UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (304 aa)
	ALP93858.1	Butyryl-CoA dehydrogenase. (379 aa)
	ALP94159.1	Immunoreactive protein Se23.5. (226 aa)
	ALP94263.1	Butyryl-CoA dehydrogenase. (382 aa)
	ALP94275.1	Butyryl-CoA dehydrogenase. (380 aa)
	ALP94278.1	4-hydroxyphenylacetate 3-monooxygenase. (488 aa)
	trmFO	tRNA:m(5)U-54 MTase gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (434 aa)
	pyrK	Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (270 aa)
	ALP94782.1	Butyryl-CoA dehydrogenase. (635 aa)
	ALP94915.1	(S)-2-hydroxy-acid oxidase chain D. (473 aa)
	ALP94966.1	Butyryl-CoA dehydrogenase. (385 aa)
	ALP94967.1	Butyryl-CoA dehydrogenase. (379 aa)
	ALP95084.1	Hemolysin; Proteins containing CBS domains. (420 aa)
	ALP95280.1	Butyryl-CoA dehydrogenase. (380 aa)
	ALP95281.1	Electron transfer flavoprotein, alpha subunit. (334 aa)
	ALP95524.1	CoA-disulfide reductase. (567 aa)
	ALP95642.1	Butyryl-CoA dehydrogenase. (380 aa)
	ALP95730.1	Xanthine dehydrogenase, FAD binding subunit. (293 aa)
	ALP95697.1	Dihydroorotate dehydrogenase electron transfer subunit. (291 aa)
	mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (621 aa)

Your Current Organism:

Intestinimonas butyriciproducens

NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALP92679.1	ALP94275.1	IB211_00283	IB211_01884c	4-hydroxybutanoyl-CoA dehydratase.	Butyryl-CoA dehydrogenase.	0.905
ALP92679.1	ALP94278.1	IB211_00283	IB211_01887c	4-hydroxybutanoyl-CoA dehydratase.	4-hydroxyphenylacetate 3-monooxygenase.	0.912
ALP92844.1	ALP93076.1	IB211_00449c	IB211_00681c	Butyryl-CoA dehydrogenase.	Acetolactate synthase large subunit.	0.413
ALP92844.1	ALP95281.1	IB211_00449c	IB211_02890c	Butyryl-CoA dehydrogenase.	Electron transfer flavoprotein, alpha subunit.	0.799
ALP93076.1	ALP92844.1	IB211_00681c	IB211_00449c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP93302.1	IB211_00681c	IB211_00908c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP93791.1	IB211_00681c	IB211_01398c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP93858.1	IB211_00681c	IB211_01465c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP94263.1	IB211_00681c	IB211_01872c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP94275.1	IB211_00681c	IB211_01884c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP94782.1	IB211_00681c	IB211_02391c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.421
ALP93076.1	ALP94966.1	IB211_00681c	IB211_02575	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP94967.1	IB211_00681c	IB211_02576	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP95280.1	IB211_00681c	IB211_02889c	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93076.1	ALP95524.1	IB211_00681c	IB211_03133c	Acetolactate synthase large subunit.	CoA-disulfide reductase.	0.629
ALP93076.1	ALP95642.1	IB211_00681c	IB211_03252	Acetolactate synthase large subunit.	Butyryl-CoA dehydrogenase.	0.413
ALP93302.1	ALP93076.1	IB211_00908c	IB211_00681c	Butyryl-CoA dehydrogenase.	Acetolactate synthase large subunit.	0.413
ALP93302.1	ALP94275.1	IB211_00908c	IB211_01884c	Butyryl-CoA dehydrogenase.	Butyryl-CoA dehydrogenase.	0.917
ALP93302.1	ALP95281.1	IB211_00908c	IB211_02890c	Butyryl-CoA dehydrogenase.	Electron transfer flavoprotein, alpha subunit.	0.961
ALP93541.1	ALP95524.1	IB211_01148	IB211_03133c	Dihydrolipoamide dehydrogenase.	CoA-disulfide reductase.	0.480

page 1 of 4

Server load: low (36%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About