STRINGSTRING
ALP94964.1 ALP94964.1 hcp-2 hcp-2 ALP94773.1 ALP94773.1 ALP94699.1 ALP94699.1 rimO rimO purF-2 purF-2 nth nth ALP94386.1 ALP94386.1 ALP94371.1 ALP94371.1 ALP94271.1 ALP94271.1 ALP94112.1 ALP94112.1 leuC leuC rlmN rlmN ispH ispH ispG ispG purF purF ALP93808.1 ALP93808.1 ALP93786.1 ALP93786.1 ALP93767.1 ALP93767.1 hcp hcp ALP93562.1 ALP93562.1 ALP93495.1 ALP93495.1 ALP93373.1 ALP93373.1 ALP93310.1 ALP93310.1 ALP95666.1 ALP95666.1 ALP93224.1 ALP93224.1 rnfB rnfB rnfC rnfC ALP92955.1 ALP92955.1 ALP92791.1 ALP92791.1 ALP92790.1 ALP92790.1 ALP92789.1 ALP92789.1 ALP92782.1 ALP92782.1 ALP92728.1 ALP92728.1 ALP92713.1 ALP92713.1 ALP92659.1 ALP92659.1 miaB miaB ALP93225.1 ALP93225.1 ALP95648.1 ALP95648.1 ALP95568.1 ALP95568.1 ALP95534.1 ALP95534.1 ALP95491.1 ALP95491.1 ALP95274.1 ALP95274.1 ALP95257.1 ALP95257.1 ALP95202.1 ALP95202.1 ALP95002.1 ALP95002.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALP94964.1Benzoyl-CoA reductase subunit BadD. (380 aa)
hcp-2Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (546 aa)
ALP94773.1Benzoyl-CoA reductase subunit BadD. (375 aa)
ALP94699.1Fe-S OXIDOREDUCTASE. (665 aa)
rimORibosomal protein S12p Asp88 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (439 aa)
purF-2Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (463 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (214 aa)
ALP94386.1Cob(III)alamin reductase or Cob(II)alamin reductase. (441 aa)
ALP94371.1ATP-dependent nuclease, subunit B; ATP-dependent DNA helicase. (1116 aa)
ALP94271.1Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunit. (309 aa)
ALP94112.1Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (323 aa)
leuC3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (425 aa)
rlmNRibosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (340 aa)
ispHSSU ribosomal protein S1p; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (668 aa)
ispG1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (345 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (457 aa)
ALP93808.1Uracil-DNA glycosylase, family 4. (238 aa)
ALP93786.1Ferredoxin. (56 aa)
ALP93767.1Nitrogenase subunit NifH like, type 1; Belongs to the NifH/BchL/ChlL family. (261 aa)
hcpHydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (532 aa)
ALP93562.1Radical SAM domain protein. (295 aa)
ALP93495.1Hypothetical protein. (475 aa)
ALP93373.1Lysine 2,3-aminomutase. (423 aa)
ALP93310.1Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (404 aa)
ALP95666.1Ribosomal RNA large subunit methyltransferase N. (53 aa)
ALP93224.1L-serine dehydratase, alpha subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family. (285 aa)
rnfBElectron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (326 aa)
rnfCElectron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (447 aa)
ALP92955.1MiaB family protein, possibly involved in tRNA or rRNA modification. (436 aa)
ALP92791.1Dissimilatory sulfite reductase; Desulfoviridin alpha and beta subunits. (254 aa)
ALP92790.1Periplasmic hydrogenase large subunit. (588 aa)
ALP92789.1D-reducing hydrogenase subunit HoxF. (599 aa)
ALP92782.1Periplasmic hydrogenase. (451 aa)
ALP92728.1Pyruvate-flavodoxin oxidoreductase. (1187 aa)
ALP92713.1Pyruvate:ferredoxin oxidoreductase, delta subunit. (101 aa)
ALP92659.1RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (448 aa)
miaBtRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (471 aa)
ALP93225.1L-serine dehydratase, beta subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family. (222 aa)
ALP95648.1Ferredoxin. (253 aa)
ALP95568.1Fumarate hydratase class I, aerobic. (296 aa)
ALP95534.1Benzoyl-CoA reductase subunit BadD. (226 aa)
ALP95491.1Domain often clustered or fused with uracil-D glycosylase. (256 aa)
ALP95274.1A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. (353 aa)
ALP95257.1Glutamate synthase small chain. (978 aa)
ALP95202.1Ribosomal RNA large subunit methyltransferase N; Belongs to the radical SAM superfamily. RlmN family. (327 aa)
ALP95002.1Ribonucleotide reductase of class III (anaerobic), activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (175 aa)
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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