STRINGSTRING
ALP92601.1 ALP92601.1 ALP92636.1 ALP92636.1 ALP92689.1 ALP92689.1 ALP92696.1 ALP92696.1 ALP92717.1 ALP92717.1 ALP92773.1 ALP92773.1 ALP92803.1 ALP92803.1 ALP92810.1 ALP92810.1 birA birA ALP92839.1 ALP92839.1 ALP92853.1 ALP92853.1 ALP92912.1 ALP92912.1 ALP92918.1 ALP92918.1 ALP92980.1 ALP92980.1 ALP92999.1 ALP92999.1 ALP93018.1 ALP93018.1 ALP93038.1 ALP93038.1 ALP93054.1 ALP93054.1 ALP93070.1 ALP93070.1 ALP93072.1 ALP93072.1 ALP93134.1 ALP93134.1 ALP93192.1 ALP93192.1 ALP93194.1 ALP93194.1 ALP93214.1 ALP93214.1 ALP93231.1 ALP93231.1 ALP93276.1 ALP93276.1 ALP93282.1 ALP93282.1 ALP93313.1 ALP93313.1 ALP93330.1 ALP93330.1 ALP93351.1 ALP93351.1 ALP93360.1 ALP93360.1 ALP93365.1 ALP93365.1 ALP93395.1 ALP93395.1 ALP93438.1 ALP93438.1 ALP93499.1 ALP93499.1 ALP93502.1 ALP93502.1 ALP93543.1 ALP93543.1 ALP93558.1 ALP93558.1 ALP93620.1 ALP93620.1 ALP93623.1 ALP93623.1 ALP93627.1 ALP93627.1 ALP93651.1 ALP93651.1 ALP93675.1 ALP93675.1 ALP93710.1 ALP93710.1 ALP93731.1 ALP93731.1 ALP93803.1 ALP93803.1 ALP93816.1 ALP93816.1 ALP93839.1 ALP93839.1 ALP93843.1 ALP93843.1 ALP93868.1 ALP93868.1 ALP93871.1 ALP93871.1 ALP93880.1 ALP93880.1 ALP93925.1 ALP93925.1 ALP93927.1 ALP93927.1 ALP93990.1 ALP93990.1 ALP93995.1 ALP93995.1 ALP94029.1 ALP94029.1 ALP94055.1 ALP94055.1 ruvB ruvB argR argR ALP94145.1 ALP94145.1 ALP94148.1 ALP94148.1 ALP94188.1 ALP94188.1 ALP94191.1 ALP94191.1 ALP94196.1 ALP94196.1 ALP94220.1 ALP94220.1 ALP94226.1 ALP94226.1 ALP94243.1 ALP94243.1 ALP94249.1 ALP94249.1 ALP94265.1 ALP94265.1 ALP94291.1 ALP94291.1 ALP94295.1 ALP94295.1 sigA sigA ALP94431.1 ALP94431.1 ALP94524.1 ALP94524.1 ALP94540.1 ALP94540.1 ALP94545.1 ALP94545.1 ALP94548.1 ALP94548.1 ALP94574.1 ALP94574.1 ALP94591.1 ALP94591.1 recX recX ALP94663.1 ALP94663.1 ALP94689.1 ALP94689.1 ALP94697.1 ALP94697.1 ALP95182.1 ALP95182.1 ALP95201.1 ALP95201.1 ALP95227.1 ALP95227.1 ALP95243.1 ALP95243.1 ALP95272.1 ALP95272.1 ALP95296.1 ALP95296.1 hrcA hrcA ALP95354.1 ALP95354.1 ALP95376.1 ALP95376.1 ALP95438.1 ALP95438.1 ALP95489.1 ALP95489.1 ALP95502.1 ALP95502.1 ALP95521.1 ALP95521.1 ALP95532.1 ALP95532.1 ALP95580.1 ALP95580.1 ALP95612.1 ALP95612.1 ALP95623.1 ALP95623.1 ALP95682.1 ALP95682.1 ALP95709.1 ALP95709.1 ALP95719.1 ALP95719.1 ALP95745.1 ALP95745.1 ALP94940.1 ALP94940.1 ALP94953.1 ALP94953.1 ALP94977.1 ALP94977.1 ALP94978.1 ALP94978.1 ALP94984.1 ALP94984.1 ALP94989.1 ALP94989.1 ALP95037.1 ALP95037.1 ALP95051.1 ALP95051.1 ALP95075.1 ALP95075.1 ALP95127.1 ALP95127.1 ALP95133.1 ALP95133.1 ALP95138.1 ALP95138.1 ALP95159.1 ALP95159.1 ALP94925.1 ALP94925.1 ALP94899.1 ALP94899.1 ALP94897.1 ALP94897.1 ALP94886.1 ALP94886.1 ALP94880.1 ALP94880.1 ALP94868.1 ALP94868.1 ALP94848.1 ALP94848.1 ALP94835.1 ALP94835.1 ALP94783.1 ALP94783.1 ALP94769.1 ALP94769.1 ALP94755.1 ALP94755.1 ALP94749.1 ALP94749.1 ALP94709.1 ALP94709.1 ALP94939.1 ALP94939.1 ALP92415.1 ALP92415.1 lexA lexA ALP92418.1 ALP92418.1 ALP92435.1 ALP92435.1 ALP92471.1 ALP92471.1 ALP92480.1 ALP92480.1 ALP92552.1 ALP92552.1 ALP92583.1 ALP92583.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALP92601.1Transcriptional regulator of fatty acid biosynthesis FabT. (151 aa)
ALP92636.1Methylated-D--protein-cysteine methyltransferase. (99 aa)
ALP92689.1Transcriptional regulator, GntRNA family. (215 aa)
ALP92696.1Transcriptional regulator, GntRNA family. (224 aa)
ALP92717.1UPF0251 protein. (125 aa)
ALP92773.1Transcriptional regulator, GntRNA family. (124 aa)
ALP92803.1Two-component response regulator. (230 aa)
ALP92810.1Transcriptional repressor for DNA biosynthesis. (171 aa)
birABiotin operon repressor / Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (332 aa)
ALP92839.1D-binding response regulator KdpE. (243 aa)
ALP92853.1Transcriptional regulator, GntRNA family. (241 aa)
ALP92912.1Transcriptional regulator, PadR family. (113 aa)
ALP92918.1Transcriptional repressor, BlaI/MecI family. (132 aa)
ALP92980.1RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (198 aa)
ALP92999.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (303 aa)
ALP93018.1Transcriptional regulator, HxlR family. (112 aa)
ALP93038.1Transcriptional repressor, BlaI/MecI family. (125 aa)
ALP93054.1Phosphate regulon transcriptional regulatory protein PhoB (SphR). (222 aa)
ALP93070.1Transcriptional regulator, PadR family. (107 aa)
ALP93072.1Transcriptional regulator, GntRNA family. (225 aa)
ALP93134.1Transcriptional regulator, DeoR family. (303 aa)
ALP93192.1Transcriptional regulator, DeoR family. (249 aa)
ALP93194.1Regulation of D-alanyl-lipoteichoic acid biosynthesis, DltRNA. (225 aa)
ALP93214.1Iron-sulfur cluster regulator IscR. (147 aa)
ALP93231.1Hypothetical protein. (68 aa)
ALP93276.1Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
ALP93282.1Phosphate regulon transcriptional regulatory protein PhoB (SphR). (231 aa)
ALP93313.1Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
ALP93330.1Transcriptional regulator, AsnC family. (160 aa)
ALP93351.1Transcriptional regulator of N-Acetylglucosamine utilization, GntRNA family. (253 aa)
ALP93360.1Transcriptional regulator, GntRNA family. (233 aa)
ALP93365.1Transcriptional regulator, GntRNA family domain. (485 aa)
ALP93395.1Hypothetical protein. (142 aa)
ALP93438.1Transcriptional regulator, ArsR family. (113 aa)
ALP93499.1Hypothetical protein. (530 aa)
ALP93502.1Hypothetical protein. (84 aa)
ALP93543.1Regulation of D-alanyl-lipoteichoic acid biosynthesis, DltRNA. (226 aa)
ALP93558.1RNA polymerase sporulation specific sigma factor SigF; Belongs to the sigma-70 factor family. (230 aa)
ALP93620.1Hypothetical protein. (85 aa)
ALP93623.1Two-component response regulator SA14-24. (233 aa)
ALP93627.1Ferric uptake regulation protein FUR; Belongs to the Fur family. (131 aa)
ALP93651.1Putative transcriptional regulator. (138 aa)
ALP93675.1Transcriptional activator protein. (64 aa)
ALP93710.1Regulation of D-alanyl-lipoteichoic acid biosynthesis, DltRNA. (222 aa)
ALP93731.1Two-component response regulator. (235 aa)
ALP93803.1Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (342 aa)
ALP93816.1Ethanolamine two-component response regulator. (179 aa)
ALP93839.1Regulation of D-alanyl-lipoteichoic acid biosynthesis, DltRNA. (250 aa)
ALP93843.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (298 aa)
ALP93868.1Hypothetical protein. (187 aa)
ALP93871.1Transcriptional regulator, DeoR family. (411 aa)
ALP93880.1Signal recognition particle associated protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. (122 aa)
ALP93925.1RNA polymerase sporulation specific sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (240 aa)
ALP93927.1RNA polymerase sporulation specific sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (275 aa)
ALP93990.1Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (220 aa)
ALP93995.1Transcriptional regulator, RpiR family. (293 aa)
ALP94029.1Transcriptional regulator, Crp/Fnr family. (206 aa)
ALP94055.1RNA polymerase sporulation specific sigma factor SigH; Belongs to the sigma-70 factor family. (211 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (349 aa)
argRArginine pathway regulatory protein ArgR, repressor of arg regulon; Regulates arginine biosynthesis genes. (150 aa)
ALP94145.1Hypothetical protein. (326 aa)
ALP94148.1Peroxide stress regulator PerRNA, FUR family; Belongs to the Fur family. (128 aa)
ALP94188.1Iron-dependent repressor IdeR/DtxR. (135 aa)
ALP94191.1Iron-dependent repressor. (132 aa)
ALP94196.1Transcriptional regulator, MarRNA family. (149 aa)
ALP94220.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)
ALP94226.1Transcriptional activator protein. (225 aa)
ALP94243.1Phosphate regulon transcriptional regulatory protein PhoB (SphR). (239 aa)
ALP94249.1Sialic acid utilization regulator, RpiR family. (281 aa)
ALP94265.1Hypothetical protein; Belongs to the LysR transcriptional regulatory family. (317 aa)
ALP94291.1Hypothetical protein. (273 aa)
ALP94295.1Hypothetical protein. (256 aa)
sigARNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (439 aa)
ALP94431.1Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. (898 aa)
ALP94524.1RNA polymerase sporulation specific sigma factor SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (229 aa)
ALP94540.1Two-component response regulator yycF. (231 aa)
ALP94545.1Mn-dependent transcriptional regulator MntRNA. (141 aa)
ALP94548.1Transcriptional regulator. (689 aa)
ALP94574.1Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (159 aa)
ALP94591.1Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake. (418 aa)
recXRegulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. (206 aa)
ALP94663.1Two-component response regulator. (229 aa)
ALP94689.1Putative two-component system response regulator. (226 aa)
ALP94697.1Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (165 aa)
ALP95182.1Putative replication initiation protein. (242 aa)
ALP95201.1Hypothetical protein. (99 aa)
ALP95227.1Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
ALP95243.1RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. (182 aa)
ALP95272.1RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily. (158 aa)
ALP95296.1Two-component response regulator SA14-24. (235 aa)
hrcAHeat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (352 aa)
ALP95354.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (299 aa)
ALP95376.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (308 aa)
ALP95438.1Transcriptional regulator, MarRNA family. (148 aa)
ALP95489.1Vancomycin response regulator VanR. (263 aa)
ALP95502.1D-binding response regulator. (226 aa)
ALP95521.1Transcriptional regulator, GntRNA family. (255 aa)
ALP95532.1Mobile element protein. (232 aa)
ALP95580.1Hypothetical protein. (256 aa)
ALP95612.1Hypothetical protein. (487 aa)
ALP95623.1RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily. (168 aa)
ALP95682.1Putative transcriptional regulator of N-Acetylglucosamine utilization, GntRNA family. (246 aa)
ALP95709.1Putative transcriptional regulator of N-Acetylglucosamine utilization, GntRNA family. (198 aa)
ALP95719.1Transcriptional regulator, GntRNA family. (122 aa)
ALP95745.1Regulatory protein, MarRNA. (158 aa)
ALP94940.1Hypothetical protein. (356 aa)
ALP94953.1Transcriptional regulator, AsnC family. (152 aa)
ALP94977.1D-binding domain of ModE. (122 aa)
ALP94978.1Stage 0 sporulation two-component response regulator (Spo0A); May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (256 aa)
ALP94984.1Two-component response regulator. (228 aa)
ALP94989.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (292 aa)
ALP95037.1Phosphate regulon transcriptional regulatory protein PhoB (SphR). (222 aa)
ALP95051.1Pseudouridine kinase. (360 aa)
ALP95075.1Transcriptional repressor, BlaI/MecI family. (121 aa)
ALP95127.1Transcription regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)
ALP95133.1Beta-lactamase repressor BlaI. (119 aa)
ALP95138.1D-binding response regulator. (229 aa)
ALP95159.1Hypothetical protein. (140 aa)
ALP94925.1LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family. (133 aa)
ALP94899.1Two-component response regulator. (233 aa)
ALP94897.1Putative transcriptional regulator of pyridoxine metabolism. (464 aa)
ALP94886.1RNA polymerase sigma-54 factor RpoN. (75 aa)
ALP94880.1Hypothetical protein. (823 aa)
ALP94868.1ATP-dependent DNA helicase. (439 aa)
ALP94848.1D-binding response regulator, OmpR family. (170 aa)
ALP94835.1Transcriptional regulator, IclR family. (254 aa)
ALP94783.1Rrf2 family transcriptional regulator. (176 aa)
ALP94769.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)
ALP94755.1Ethanolamine two-component response regulator. (194 aa)
ALP94749.1D-binding response regulator, LuxR family. (200 aa)
ALP94709.1Transcriptional regulator, MarRNA family. (152 aa)
ALP94939.1Hypothetical protein. (130 aa)
ALP92415.1Methylated-D--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (156 aa)
lexASOS-response repressor and protease LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (224 aa)
ALP92418.1Transcriptional regulator, MarRNA family. (157 aa)
ALP92435.1Transcriptional regulator, SARP family protein. (405 aa)
ALP92471.1Two-component response regulator. (98 aa)
ALP92480.1Transcriptional regulator ligR, LysR family; Belongs to the LysR transcriptional regulatory family. (307 aa)
ALP92552.1LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family. (311 aa)
ALP92583.1Cadmium efflux system accessory protein. (120 aa)
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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