(26 nodes) Cell motility network (Myxococcus hansupus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKQ70590.1	Flagellar motor rotation protein MotB. (295 aa)
	AKQ66157.1	Pyridoxamine 5'-phosphate oxidase. (151 aa)
	AKQ66231.1	Carbon monoxide dehydrogenase E protein. (465 aa)
	AKQ63268.1	Twitching motility protein PilT. (586 aa)
	AKQ63678.1	Hypothetical protein. (59 aa)
	AKQ63878.1	Hypothetical protein. (113 aa)
	AKQ64210.1	Twitching motility protein PilT. (373 aa)
	AKQ64222.1	Type IV pilus biogenesis protein PilN. (225 aa)
	AKQ64223.1	Type IV pilus biogenesis protein PilO. (204 aa)
	AKQ64354.1	Type III secretion system apparatus protein YscQ/HrcQ. (381 aa)
	AKQ69726.1	Type IV fimbrial biogenesis protein PilY1. (1423 aa)
	AKQ65261.1	Membrane protein, MarC family. (208 aa)
	AKQ70597.1	Hypothetical protein. (122 aa)
	AKQ63267.1	Twitching motility protein PilT. (369 aa)
	AKQ67015.1	TPR domain protein, putative component of TonB system. (253 aa)
	AKQ67357.1	DNA polymerase X family. (448 aa)
	AKQ67683.1	Flagellar motor switch protein FliM. (466 aa)
	AKQ68086.1	Twitching motility protein PilT. (472 aa)
	AKQ68489.1	Membrane protein-like protein. (173 aa)
	AKQ68726.1	Type IV fimbrial biogenesis protein PilY1. (1492 aa)
	AKQ69035.1	Type IV fimbrial biogenesis protein PilX. (241 aa)
	AKQ69036.1	Type IV fimbrial biogenesis protein PilY1. (1465 aa)
	AKQ69226.1	Flagellar motor rotation protein MotB. (267 aa)
	AKQ69368.1	Cell division protein FtsH. (167 aa)
	AKQ69666.1	Twitching motility protein PilT. (344 aa)
	AKQ69724.1	Type IV fimbrial biogenesis protein PilX. (238 aa)

Your Current Organism:

Myxococcus hansupus

NCBI taxonomy Id: 1297742
Other names: M. hansupus, Myxococcus sp. (contaminant ex DSM 436), Myxococcus sp. mixupus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKQ63267.1	AKQ63268.1	A176_000179	A176_000180	Twitching motility protein PilT.	Twitching motility protein PilT.	0.814
AKQ63267.1	AKQ64223.1	A176_000179	A176_001135	Twitching motility protein PilT.	Type IV pilus biogenesis protein PilO.	0.518
AKQ63268.1	AKQ63267.1	A176_000180	A176_000179	Twitching motility protein PilT.	Twitching motility protein PilT.	0.814
AKQ64210.1	AKQ64223.1	A176_001122	A176_001135	Twitching motility protein PilT.	Type IV pilus biogenesis protein PilO.	0.531
AKQ64222.1	AKQ64223.1	A176_001134	A176_001135	Type IV pilus biogenesis protein PilN.	Type IV pilus biogenesis protein PilO.	0.998
AKQ64222.1	AKQ68726.1	A176_001134	A176_005638	Type IV pilus biogenesis protein PilN.	Type IV fimbrial biogenesis protein PilY1.	0.448
AKQ64223.1	AKQ63267.1	A176_001135	A176_000179	Type IV pilus biogenesis protein PilO.	Twitching motility protein PilT.	0.518
AKQ64223.1	AKQ64210.1	A176_001135	A176_001122	Type IV pilus biogenesis protein PilO.	Twitching motility protein PilT.	0.531
AKQ64223.1	AKQ64222.1	A176_001135	A176_001134	Type IV pilus biogenesis protein PilO.	Type IV pilus biogenesis protein PilN.	0.998
AKQ64223.1	AKQ68086.1	A176_001135	A176_004998	Type IV pilus biogenesis protein PilO.	Twitching motility protein PilT.	0.542
AKQ64223.1	AKQ69666.1	A176_001135	A176_006578	Type IV pilus biogenesis protein PilO.	Twitching motility protein PilT.	0.492
AKQ64354.1	AKQ67683.1	A176_001266	A176_004595	Type III secretion system apparatus protein YscQ/HrcQ.	Flagellar motor switch protein FliM.	0.997
AKQ64354.1	AKQ69226.1	A176_001266	A176_006138	Type III secretion system apparatus protein YscQ/HrcQ.	Flagellar motor rotation protein MotB.	0.804
AKQ64354.1	AKQ70590.1	A176_001266	A176_007502	Type III secretion system apparatus protein YscQ/HrcQ.	Flagellar motor rotation protein MotB.	0.804
AKQ64354.1	AKQ70597.1	A176_001266	A176_007509	Type III secretion system apparatus protein YscQ/HrcQ.	Hypothetical protein.	0.804
AKQ67683.1	AKQ64354.1	A176_004595	A176_001266	Flagellar motor switch protein FliM.	Type III secretion system apparatus protein YscQ/HrcQ.	0.997
AKQ67683.1	AKQ69226.1	A176_004595	A176_006138	Flagellar motor switch protein FliM.	Flagellar motor rotation protein MotB.	0.892
AKQ67683.1	AKQ70590.1	A176_004595	A176_007502	Flagellar motor switch protein FliM.	Flagellar motor rotation protein MotB.	0.906
AKQ67683.1	AKQ70597.1	A176_004595	A176_007509	Flagellar motor switch protein FliM.	Hypothetical protein.	0.804
AKQ68086.1	AKQ64223.1	A176_004998	A176_001135	Twitching motility protein PilT.	Type IV pilus biogenesis protein PilO.	0.542