STRINGSTRING
SHG07658.1 SHG07658.1 SHG03446.1 SHG03446.1 SHF89393.1 SHF89393.1 SHF43675.1 SHF43675.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHG07658.1Signal transduction histidine kinase. (571 aa)
SHG03446.1PAS domain-containing protein. (432 aa)
SHF89393.1PAS domain S-box-containing protein. (1024 aa)
SHF43675.1PAS domain S-box-containing protein. (1039 aa)
Your Current Organism:
Bacteroides luti
NCBI taxonomy Id: 1297750
Other names: B. luti, Bacteroides luti Hatamoto et al. 2014, Bacteroides sp. UasXn-3, DSM 26991, JCM 19020, strain UasXn-3
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