STRINGSTRING
TST_0153 TST_0153 TST_0321 TST_0321 kdsC kdsC lpxB lpxB TST_0469 TST_0469 lpxC lpxC TST_0514 TST_0514 TST_0676 TST_0676 TST_0916 TST_0916 lpxA lpxA sufBD sufBD sufC sufC TST_0923 TST_0923 mUTT mUTT hslO hslO TST_0929 TST_0929 rnhB rnhB lpxK lpxK TST_1218 TST_1218 TST_1219 TST_1219 kdsA kdsA kdsB kdsB TST_1223 TST_1223 TST_1292 TST_1292 TST_1293 TST_1293 kdtA kdtA TST_1657 TST_1657 arsA arsA TST_1659 TST_1659 cstA cstA wbpE wbpE waaC waaC TST_1669 TST_1669 fabZ fabZ lpxD lpxD hlpA hlpA yaeT yaeT clpC clpC TST_1675 TST_1675 waaF waaF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TST_0153Glycosyl transferase, family 9. (322 aa)
TST_0321Hypothetical protein. (410 aa)
kdsC3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase. (171 aa)
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (354 aa)
TST_0469Conserved hypothetical protein. (262 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (285 aa)
TST_0514Cysteine desulfurase family protein. (387 aa)
TST_0676Conserved hypothetical protein. (95 aa)
TST_0916Oxidoreductase. (325 aa)
lpxAUDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (261 aa)
sufBDFe-S cluster assembly protein SufBD. (352 aa)
sufCFe-S cluster assembly ATP-binding protein. (253 aa)
TST_0923Hypothetical protein. (218 aa)
mUTT7,8-dihydro-8-oxoguanine triphosphatase; Belongs to the Nudix hydrolase family. (147 aa)
hslOMolecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. (333 aa)
TST_0929Chloride channel protein, CIC family. (593 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (199 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (341 aa)
TST_1218Type 11 methyltransferase. (211 aa)
TST_1219Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. (324 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; KDO 8-P synthase; Belongs to the KdsA family. (275 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (241 aa)
TST_1223HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. (147 aa)
TST_1292D-beta-D-heptose 1-phosphate adenosyltransferase; C-terminus of RfaE bifunctional protein. (163 aa)
TST_1293D-beta-D-heptose 7-phosphate kinase; N-terminus of RfaE bifunctional protein. (337 aa)
kdtA3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (428 aa)
TST_1657Conserved hypothetical protein. (206 aa)
arsAArsenite-transporting ATPase. (305 aa)
TST_1659Conserved hypothetical protein. (90 aa)
cstACarbon starvation protein. (574 aa)
wbpEUDP-3-keto-D-GlcNAcA aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (368 aa)
waaCHeptosyltransferase I. (302 aa)
TST_1669Hypothetical protein. (604 aa)
fabZ3R-hydroxymyristoyl ACP dehydrase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (146 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (335 aa)
hlpAOuter membrane protein. (168 aa)
yaeTOuter membrane protein. (788 aa)
clpCATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. (810 aa)
TST_1675Amidohydrolase family protein. (358 aa)
waaFHeptosyltransferase II. (332 aa)
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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