(5 nodes) Mixed, incl. FecCD transport family, and ABC-2 transporter network (Thermosulfidibacter takaii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TST_0127	Antibiotic transport system ATP-binding protein. (281 aa)
	TST_0128	Antibiotic transport system permease. (244 aa)
	TST_0129	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (325 aa)
	TST_0130	Iron complex transport system ATP-binding protein. (242 aa)
	TST_0131	Iron complex transport system substrate-binding protein. (260 aa)

Your Current Organism:

Thermosulfidibacter takaii

NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
TST_0127	TST_0128	Antibiotic transport system ATP-binding protein.	Antibiotic transport system permease.	0.979
TST_0127	TST_0129	Antibiotic transport system ATP-binding protein.	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.796
TST_0127	TST_0130	Antibiotic transport system ATP-binding protein.	Iron complex transport system ATP-binding protein.	0.838
TST_0127	TST_0131	Antibiotic transport system ATP-binding protein.	Iron complex transport system substrate-binding protein.	0.812
TST_0128	TST_0127	Antibiotic transport system permease.	Antibiotic transport system ATP-binding protein.	0.979
TST_0128	TST_0129	Antibiotic transport system permease.	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.781
TST_0128	TST_0130	Antibiotic transport system permease.	Iron complex transport system ATP-binding protein.	0.816
TST_0128	TST_0131	Antibiotic transport system permease.	Iron complex transport system substrate-binding protein.	0.786
TST_0129	TST_0127	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Antibiotic transport system ATP-binding protein.	0.796
TST_0129	TST_0128	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Antibiotic transport system permease.	0.781
TST_0129	TST_0130	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system ATP-binding protein.	0.999
TST_0129	TST_0131	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron complex transport system substrate-binding protein.	0.999
TST_0130	TST_0127	Iron complex transport system ATP-binding protein.	Antibiotic transport system ATP-binding protein.	0.838
TST_0130	TST_0128	Iron complex transport system ATP-binding protein.	Antibiotic transport system permease.	0.816
TST_0130	TST_0129	Iron complex transport system ATP-binding protein.	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.999
TST_0130	TST_0131	Iron complex transport system ATP-binding protein.	Iron complex transport system substrate-binding protein.	0.998
TST_0131	TST_0127	Iron complex transport system substrate-binding protein.	Antibiotic transport system ATP-binding protein.	0.812
TST_0131	TST_0128	Iron complex transport system substrate-binding protein.	Antibiotic transport system permease.	0.786
TST_0131	TST_0129	Iron complex transport system substrate-binding protein.	Iron complex transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.999
TST_0131	TST_0130	Iron complex transport system substrate-binding protein.	Iron complex transport system ATP-binding protein.	0.998