STRINGSTRING
TST_1298 TST_1298 kdsB kdsB kdsA kdsA TST_1205 TST_1205 lpxK lpxK TST_0153 TST_0153 TST_0669 TST_0669 TST_0460 TST_0460 kdsC kdsC rfbA rfbA rfbD rfbD TST_0260 TST_0260 TST_0258 TST_0258 waaF waaF TST_1717 TST_1717 waaC waaC glgA glgA TST_1466 TST_1466 kdtA kdtA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TST_1298Lipopolysaccharide biosynthesis protein. (290 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (241 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; KDO 8-P synthase; Belongs to the KdsA family. (275 aa)
TST_1205Glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family. (529 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (341 aa)
TST_0153Glycosyl transferase, family 9. (322 aa)
TST_0669Glycosyl transferase, family 39; Similar to 4-amino-4-deoxy-L-arabinose transferase ArnT EC:2.4.2.43. (453 aa)
TST_0460Glycosyl transferase, family 39. (452 aa)
kdsC3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase. (171 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (293 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (278 aa)
TST_0260Glycosyl transferase, group 2. (346 aa)
TST_0258Glycosyl transferase, group 1. (353 aa)
waaFHeptosyltransferase II. (332 aa)
TST_1717Hypothetical protein; Glycosyl transferase family 39. (507 aa)
waaCHeptosyltransferase I. (302 aa)
glgAStarch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (461 aa)
TST_1466Conserved hypothetical protein. (659 aa)
kdtA3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (428 aa)
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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