STRINGSTRING
plsY plsY TST_0107 TST_0107 TST_0117 TST_0117 TST_0153 TST_0153 fadN fadN fadA fadA ispDF ispDF TST_0242 TST_0242 TST_0258 TST_0258 kdsC kdsC TST_0460 TST_0460 lpxB lpxB TST_0469 TST_0469 TST_0470 TST_0470 lpxC lpxC TST_0544 TST_0544 plsC plsC TST_0656 TST_0656 TST_0657 TST_0657 TST_0658 TST_0658 TST_0669 TST_0669 ispB ispB TST_0719 TST_0719 TST_0723 TST_0723 gcpE gcpE TST_0843 TST_0843 TST_0883 TST_0883 TST_0884 TST_0884 lpxA lpxA TST_0924 TST_0924 TST_0950 TST_0950 TST_0951 TST_0951 glmU glmU TST_0969 TST_0969 TST_0975 TST_0975 gpsA gpsA lpxK lpxK TST_1026 TST_1026 murG murG TST_1063 TST_1063 TST_1134 TST_1134 kdsA kdsA kdsB kdsB pssA pssA psd psd TST_1298 TST_1298 TST_1325 TST_1325 acpP acpP TST_1327 TST_1327 fabD fabD fabH fabH plsX plsX TST_1353 TST_1353 kdtA kdtA pycB pycB TST_1365 TST_1365 accD accD TST_1466 TST_1466 dxr dxr cdsA cdsA ispH ispH TST_1578 TST_1578 TST_1579 TST_1579 TST_1581 TST_1581 TST_1582 TST_1582 TST_1583 TST_1583 uppS uppS waaC waaC TST_1663 TST_1663 TST_1664 TST_1664 fabZ fabZ lpxD lpxD accA accA TST_1717 TST_1717 dxs dxs ispA ispA ispE ispE waaF waaF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
plsYGlycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. (197 aa)
TST_01073-hydroxypropionyl-coenzyme A dehydratase; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG EC:5.3.3.18. (259 aa)
TST_0117CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (198 aa)
TST_0153Glycosyl transferase, family 9. (322 aa)
fadN3-hydroxyacyl-CoA dehydrogenase. (794 aa)
fadAacetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
ispDF2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). (376 aa)
TST_0242Conserved hypothetical protein. (303 aa)
TST_0258Glycosyl transferase, group 1. (353 aa)
kdsC3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase. (171 aa)
TST_0460Glycosyl transferase, family 39. (452 aa)
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (354 aa)
TST_0469Conserved hypothetical protein. (262 aa)
TST_0470Hypothetical protein. (225 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (285 aa)
TST_0544Hypothetical protein. (401 aa)
plsC1-acyl-sn-glycerol-3-phosphate acyltransferase. (244 aa)
TST_0656acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
TST_06573-hydroxybutyryl-CoA dehydrogenase. (289 aa)
TST_0658Hypothetical protein; Similar to 3-hydroxybutyryl-CoA dehydratase Crt EC:4.2.1.55. (248 aa)
TST_0669Glycosyl transferase, family 39; Similar to 4-amino-4-deoxy-L-arabinose transferase ArnT EC:2.4.2.43. (453 aa)
ispBOctaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. (321 aa)
TST_0719CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (186 aa)
TST_07233-oxoacyl-[acyl-carrier protein] reductase. (246 aa)
gcpE(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (360 aa)
TST_08433-hydroxybutyryl-CoA dehydratase. (248 aa)
TST_0883Myo-inositol-1-phosphate synthase. (394 aa)
TST_0884CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (425 aa)
lpxAUDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (261 aa)
TST_09243-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (386 aa)
TST_09503-hydroxybutyryl-CoA dehydratase. (270 aa)
TST_09513-hydroxybutyryl-CoA dehydrogenase. (282 aa)
glmUBifunctional UDP-N-acetylglucosamine pyrophosphorylase/Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (463 aa)
TST_0969enoyl-CoA hydratase/isomerase. (261 aa)
TST_0975CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (177 aa)
gpsAGlycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (324 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (341 aa)
TST_10263-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (250 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (351 aa)
TST_1063acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
TST_1134Phospholipase D/Transphosphatidylase. (174 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; KDO 8-P synthase; Belongs to the KdsA family. (275 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (241 aa)
pssAPhosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (240 aa)
psdPhosphatidylserine decarboxylase. (201 aa)
TST_1298Lipopolysaccharide biosynthesis protein. (290 aa)
TST_13253-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (410 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (84 aa)
TST_13273-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (243 aa)
fabD[acyl-carrier-protein] S-malonyltransferase. (306 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (326 aa)
plsXGlycerol-3-phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (364 aa)
TST_13533-oxoacyl-[acyl-carrier protein] reductase. (254 aa)
kdtA3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (428 aa)
pycBPyruvate carboxylase subunit B. (173 aa)
TST_1365acetyl-CoA carboxylase, biotin carboxylase subunit. (500 aa)
accDacetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (284 aa)
TST_1466Conserved hypothetical protein. (659 aa)
dxr1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (380 aa)
cdsAPhosphatidate cytidylyltransferase; Belongs to the CDS family. (252 aa)
ispH4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (289 aa)
TST_1578acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (386 aa)
TST_1579Conserved hypothetical protein; Similar to hydroxymethylglutaryl-CoA synthase EC:2.3.3.10. (351 aa)
TST_1581enoyl-CoA hydratase/isomerase; Similar to methylglutaconyl-CoA hydratase EC:4.2.1.18. (258 aa)
TST_1582acetyl-CoA carboxylase biotin carboxyl carrier protein. (71 aa)
TST_1583acetyl-CoA carboxylase, biotin carboxylase subunit. (447 aa)
uppSUndecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (236 aa)
waaCHeptosyltransferase I. (302 aa)
TST_1663acetyl-CoA carboxylase, biotin carboxylase subunit. (443 aa)
TST_1664acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (160 aa)
fabZ3R-hydroxymyristoyl ACP dehydrase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (146 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (335 aa)
accAacetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa)
TST_1717Hypothetical protein; Glycosyl transferase family 39. (507 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (617 aa)
ispAGeranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. (303 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (279 aa)
waaFHeptosyltransferase II. (332 aa)
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
Server load: low (18%) [HD]