STRINGSTRING
J056_002835 J056_002835 J056_002743 J056_002743 J056_002732 J056_002732 J056_002821 J056_002821 J056_002571 J056_002571 J056_002608 J056_002608 J056_002519 J056_002519 J056_002393 J056_002393 J056_001904 J056_001904 J056_001922 J056_001922 J056_001853 J056_001853 J056_002384 J056_002384 J056_001826 J056_001826 J056_001841 J056_001841 J056_001737 J056_001737 J056_001666 J056_001666 J056_001642 J056_001642 J056_001263 J056_001263 J056_001217 J056_001217 J056_001291 J056_001291 J056_001015 J056_001015 J056_001033 J056_001033 J056_000943 J056_000943 J056_000585 J056_000585 J056_004756 J056_004756 J056_004699 J056_004699 J056_004822 J056_004822 J056_002627 J056_002627 J056_004603 J056_004603 J056_001911 J056_001911 J056_003829 J056_003829 J056_004361 J056_004361 J056_003959 J056_003959 J056_001700 J056_001700 J056_003998 J056_003998 J056_004075 J056_004075 J056_004073 J056_004073 J056_003620 J056_003620 J056_003633 J056_003633 J056_001607 J056_001607 J056_003631 J056_003631 J056_000719 J056_000719 J056_003336 J056_003336 J056_003292 J056_003292 J056_003402 J056_003402 J056_004733 J056_004733 J056_003016 J056_003016 J056_004217 J056_004217 J056_002005 J056_002005 J056_004017 J056_004017 J056_003637 J056_003637 J056_003657 J056_003657 J056_002003 J056_002003 J056_002221 J056_002221 J056_002098 J056_002098 J056_002313 J056_002313 J056_000363 J056_000363 J056_000070 J056_000070 J056_000092 J056_000092 J056_003128 J056_003128 J056_002935 J056_002935 J056_000046 J056_000046 J056_000128 J056_000128
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
J056_002835NADH oxidase. (461 aa)
J056_002743Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (365 aa)
J056_002732Mannose-6-phosphate isomerase. (422 aa)
J056_002821Malate dehydrogenase. (341 aa)
J056_002571Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (367 aa)
J056_002608Uncharacterized protein. (989 aa)
J056_002519Putative phosphoglycerate mutase. (216 aa)
J056_002393Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (459 aa)
J056_001904Triosephosphate isomerase. (252 aa)
J056_001922Transket_pyr domain-containing protein. (1290 aa)
J056_001853Dihydrolipoyl dehydrogenase. (539 aa)
J056_002384Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (354 aa)
J056_001826Putative fumarate reductase. (631 aa)
J056_001841Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (446 aa)
J056_001737Malic enzyme. (544 aa)
J056_001666Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (163 aa)
J056_001642Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (413 aa)
J056_001263Glyceraldehyde-3-phosphate dehydrogenase. (336 aa)
J056_001217Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. (367 aa)
J056_001291Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (267 aa)
J056_001015Ribose-5-phosphate isomerase; Belongs to the synaptobrevin family. (650 aa)
J056_001033Phosphotransferase. (454 aa)
J056_000943Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (505 aa)
J056_000585Pyruvate kinase; Belongs to the pyruvate kinase family. (467 aa)
J056_004756Formyltetrahydrofolate deformylase. (348 aa)
J056_004699Malate dehydrogenase. (333 aa)
J056_004822Uncharacterized protein. (182 aa)
J056_002627Citrate synthase; Belongs to the citrate synthase family. (458 aa)
J056_004603Transketolase. (634 aa)
J056_001911Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (324 aa)
J056_003829Uncharacterized protein. (589 aa)
J056_004361Putative NAD-dependent malic enzyme 3. (607 aa)
J056_003959Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (426 aa)
J056_001700ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (817 aa)
J056_0039986-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (284 aa)
J056_004075Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (688 aa)
J056_004073Fructose-2,6-bisphosphatase. (560 aa)
J056_003620Gluconokinase; Belongs to the gluconokinase GntK/GntV family. (190 aa)
J056_003633Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (213 aa)
J056_001607Enolase. (444 aa)
J056_003631Transaldolase. (349 aa)
J056_000719Putative phosphoketolase. (842 aa)
J056_003336Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (778 aa)
J056_003292Fructose-1,6-bisphosphatase, cytosolic; Belongs to the FBPase class 1 family. (336 aa)
J056_003402UPF0012 hydrolase C26A3.11. (1390 aa)
J056_0047336-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 4. (506 aa)
J056_003016Uncharacterized protein. (308 aa)
J056_004217Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (327 aa)
J056_002005Sedoheptulose 1,7-bisphosphatase. (229 aa)
J056_004017Transket_pyr domain-containing protein. (1019 aa)
J056_003637Lipoyl-binding domain-containing protein. (399 aa)
J056_003657Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (231 aa)
J056_002003ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. (1144 aa)
J056_002221Glucose-6-phosphate isomerase; Belongs to the GPI family. (547 aa)
J056_002098Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (641 aa)
J056_002313Phosphoenolpyruvate carboxykinase. (544 aa)
J056_0003636-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (493 aa)
J056_000070Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1192 aa)
J056_000092Transketolase-like protein 2. (745 aa)
J056_003128Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (368 aa)
J056_002935Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (227 aa)
J056_000046Phosphotransferase. (504 aa)
J056_000128Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (420 aa)
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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