7 items (Galdieria sulphuraria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Gasu_20880	Proteasome subunit alpha type. (264 aa)
	Gasu_21750	Proteasome subunit alpha type. (252 aa)
	Gasu_27920	Proteasome subunit alpha type. (235 aa)
	Gasu_27820	Proteasome subunit alpha type. (250 aa)
	Gasu_54410	Proteasome subunit alpha type. (247 aa)
	Gasu_15880	Proteasome subunit alpha type. (252 aa)
	Gasu_16900	Proteasome subunit alpha type. (294 aa)

Your Current Organism:

Galdieria sulphuraria

NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gasu_15880	Gasu_16900	M2Y5E9	M2XL93	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_15880	Gasu_20880	M2Y5E9	M2Y471	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_15880	Gasu_21750	M2Y5E9	M2XK43	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_15880	Gasu_27820	M2Y5E9	M2X0C1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_15880	Gasu_27920	M2Y5E9	M2X0D5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_15880	Gasu_54410	M2Y5E9	M2WSX6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_16900	Gasu_15880	M2XL93	M2Y5E9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_16900	Gasu_20880	M2XL93	M2Y471	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_16900	Gasu_21750	M2XL93	M2XK43	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_16900	Gasu_27820	M2XL93	M2X0C1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_16900	Gasu_27920	M2XL93	M2X0D5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_16900	Gasu_54410	M2XL93	M2WSX6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_20880	Gasu_15880	M2Y471	M2Y5E9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_20880	Gasu_16900	M2Y471	M2XL93	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_20880	Gasu_21750	M2Y471	M2XK43	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_20880	Gasu_27820	M2Y471	M2X0C1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_20880	Gasu_27920	M2Y471	M2X0D5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_20880	Gasu_54410	M2Y471	M2WSX6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_21750	Gasu_15880	M2XK43	M2Y5E9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
Gasu_21750	Gasu_16900	M2XK43	M2XL93	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999