18 items (Galdieria sulphuraria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Gasu_49630	40S ribosomal protein S27Ae. (151 aa)
	Gasu_14690	Uncharacterized protein. (270 aa)
	Gasu_36540	Histone H2B; Belongs to the histone H2B family. (120 aa)
	Gasu_51340	Uncharacterized protein. (406 aa)
	Gasu_59990	Pre-mRNA-processing factor 4. (793 aa)
	Gasu_35890	PAF1 complex protein. (434 aa)
	Gasu_45750	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (344 aa)
	Gasu_53710	Peroxisomal membrane protein peroxin10 isoform 1. (280 aa)
	Gasu_63250	Histone H2B; Belongs to the histone H2B family. (119 aa)
	Gasu_66020	Ubiquitin-like domain-containing protein. (32 aa)
	Gasu_12420	SNF2 domain-containing protein. (1531 aa)
	Gasu_11500	E3 ubiquitin-protein ligase RAD18. (386 aa)
	Gasu_10260	Uncharacterized protein. (1007 aa)
	Gasu_59660	Histone H2B; Belongs to the histone H2B family. (120 aa)
	Gasu_11150	RNA polymerase-associated protein RTF1-like protein. (605 aa)
	Gasu_09440	Histone H2B; Belongs to the histone H2B family. (66 aa)
	Gasu_18910	E3 ubiquitin protein ligase. (671 aa)
	Gasu_30280	Protein YIPF. (209 aa)

Your Current Organism:

Galdieria sulphuraria

NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gasu_09440	Gasu_10260	M2Y775	M2X575	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein.	0.709
Gasu_09440	Gasu_11150	M2Y775	M2Y7C4	Histone H2B; Belongs to the histone H2B family.	RNA polymerase-associated protein RTF1-like protein.	0.601
Gasu_09440	Gasu_18910	M2Y775	M2Y4L9	Histone H2B; Belongs to the histone H2B family.	E3 ubiquitin protein ligase.	0.561
Gasu_09440	Gasu_35890	M2Y775	M2XZL6	Histone H2B; Belongs to the histone H2B family.	PAF1 complex protein.	0.679
Gasu_09440	Gasu_49630	M2Y775	M2WUB7	Histone H2B; Belongs to the histone H2B family.	40S ribosomal protein S27Ae.	0.518
Gasu_09440	Gasu_51340	M2Y775	M2VVM6	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein.	0.661
Gasu_09440	Gasu_66020	M2Y775	M2XQ37	Histone H2B; Belongs to the histone H2B family.	Ubiquitin-like domain-containing protein.	0.518
Gasu_10260	Gasu_09440	M2X575	M2Y775	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.709
Gasu_10260	Gasu_11150	M2X575	M2Y7C4	Uncharacterized protein.	RNA polymerase-associated protein RTF1-like protein.	0.997
Gasu_10260	Gasu_18910	M2X575	M2Y4L9	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.793
Gasu_10260	Gasu_35890	M2X575	M2XZL6	Uncharacterized protein.	PAF1 complex protein.	0.999
Gasu_10260	Gasu_36540	M2X575	M2VZY7	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.709
Gasu_10260	Gasu_49630	M2X575	M2WUB7	Uncharacterized protein.	40S ribosomal protein S27Ae.	0.579
Gasu_10260	Gasu_51340	M2X575	M2VVM6	Uncharacterized protein.	Uncharacterized protein.	0.999
Gasu_10260	Gasu_59660	M2X575	M2XSM4	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.709
Gasu_10260	Gasu_59990	M2X575	M2VT84	Uncharacterized protein.	Pre-mRNA-processing factor 4.	0.634
Gasu_10260	Gasu_63250	M2X575	M2XRF7	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.709
Gasu_10260	Gasu_66020	M2X575	M2XQ37	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.579
Gasu_11150	Gasu_09440	M2Y7C4	M2Y775	RNA polymerase-associated protein RTF1-like protein.	Histone H2B; Belongs to the histone H2B family.	0.601
Gasu_11150	Gasu_10260	M2Y7C4	M2X575	RNA polymerase-associated protein RTF1-like protein.	Uncharacterized protein.	0.997