STRINGSTRING
yqhC yqhC PKB_0189 PKB_0189 PKB_0198 PKB_0198 PKB_0242 PKB_0242 PKB_0243 PKB_0243 PKB_0436 PKB_0436 PKB_0494 PKB_0494 PKB_0495 PKB_0495 yfcH yfcH PKB_0942 PKB_0942 PKB_0943 PKB_0943 PKB_1011 PKB_1011 PKB_1432 PKB_1432 PKB_1435 PKB_1435 PKB_1438 PKB_1438 PKB_1832 PKB_1832 PKB_1862 PKB_1862 PKB_1863 PKB_1863 PKB_1864 PKB_1864 PKB_1879 PKB_1879 PKB_1880 PKB_1880 PKB_1881 PKB_1881 PKB_1898 PKB_1898 PKB_1899 PKB_1899 PKB_1928 PKB_1928 xylS3 xylS3 PKB_2124 PKB_2124 PKB_2125 PKB_2125 PKB_2126 PKB_2126 PKB_2128 PKB_2128 PKB_2129 PKB_2129 PKB_2130 PKB_2130 PKB_2131 PKB_2131 PKB_2195 PKB_2195 PKB_2201 PKB_2201 PKB_2202 PKB_2202 PKB_2203 PKB_2203 PKB_2204 PKB_2204 PKB_2205 PKB_2205 PKB_2263 PKB_2263 PKB_2264 PKB_2264 PKB_2265 PKB_2265 PKB_2297 PKB_2297 PKB_2303 PKB_2303 PKB_2304 PKB_2304 PKB_2305 PKB_2305 PKB_2314 PKB_2314 PKB_2467 PKB_2467 PKB_2468 PKB_2468 PKB_2469 PKB_2469 PKB_2470 PKB_2470 PKB_2471 PKB_2471 PKB_2472 PKB_2472 PKB_2577 PKB_2577 PKB_2579 PKB_2579 PKB_2580 PKB_2580 PKB_2585 PKB_2585 PKB_2586 PKB_2586 PKB_2652 PKB_2652 PKB_2653 PKB_2653 feaR feaR PKB_2765 PKB_2765 PKB_2802 PKB_2802 PKB_2815 PKB_2815 PKB_2832 PKB_2832 PKB_2833 PKB_2833 PKB_2838 PKB_2838 yvaG yvaG PKB_2891 PKB_2891 PKB_2953 PKB_2953 PKB_2954 PKB_2954 PKB_2977 PKB_2977 PKB_3055 PKB_3055 PKB_3088 PKB_3088 PKB_3089 PKB_3089 PKB_3090 PKB_3090 PKB_3168 PKB_3168 PKB_3169 PKB_3169 PKB_3322 PKB_3322 PKB_3323 PKB_3323 PKB_3325 PKB_3325 PKB_3489 PKB_3489 PKB_3490 PKB_3490 PKB_3491 PKB_3491 PKB_3492 PKB_3492 PKB_3498 PKB_3498 PKB_3499 PKB_3499 PKB_3500 PKB_3500 PKB_3587 PKB_3587 PKB_3656 PKB_3656 PKB_3657 PKB_3657 PKB_3658 PKB_3658 PKB_3967 PKB_3967 PKB_3968 PKB_3968 blaP blaP PKB_4039 PKB_4039 PKB_4040 PKB_4040 PKB_4081 PKB_4081 PKB_4153 PKB_4153 PKB_4154 PKB_4154 mmsr1 mmsr1 PKB_4191 PKB_4191 PKB_4282 PKB_4282 PKB_4296 PKB_4296 PKB_4297 PKB_4297 PKB_4298 PKB_4298 PKB_4299 PKB_4299 PKB_4300 PKB_4300 PKB_4301 PKB_4301 PKB_4302 PKB_4302 PKB_4303 PKB_4303 PKB_4304 PKB_4304 oprd11 oprd11 PKB_4325 PKB_4325 thcF thcF PKB_4375 PKB_4375 PKB_4448 PKB_4448 PKB_4449 PKB_4449 PKB_4450 PKB_4450 PKB_4451 PKB_4451 PKB_4452 PKB_4452 PKB_4544 PKB_4544 PKB_4658 PKB_4658 PKB_4677 PKB_4677 mmsr3 mmsr3 PKB_4951 PKB_4951 PKB_4952 PKB_4952 PKB_5150 PKB_5150 PKB_5151 PKB_5151 PKB_5152 PKB_5152 PKB_5153 PKB_5153 PKB_5326 PKB_5326 PKB_5327 PKB_5327 PKB_5587 PKB_5587 PKB_5673 PKB_5673 PKB_5674 PKB_5674 PKB_5675 PKB_5675 recG recG PKB_5757 PKB_5757
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yqhCTranscriptional regulator, AraC family. (313 aa)
PKB_0189Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain. (338 aa)
PKB_0198Hypothetical protein. (238 aa)
PKB_0242Hypothetical membrane protein. (143 aa)
PKB_0243Hypothetical protein. (152 aa)
PKB_0436Hypothetical protein. (262 aa)
PKB_0494Glutathione S-transferase domain-containing protein. (207 aa)
PKB_0495Hypothetical protein; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. (318 aa)
yfcHEpimerase family protein yfcH. (300 aa)
PKB_0942DNA-binding domain-containing protein, AraC-type. (291 aa)
PKB_0943Membrane protein. (297 aa)
PKB_1011Hypothetical protein. (180 aa)
PKB_1432Proline utilization regulator. (249 aa)
PKB_1435Conserved hypothetical secreted protein. (145 aa)
PKB_1438Hypothetical protein. (404 aa)
PKB_1832AraC family transcriptional regulator. (267 aa)
PKB_1862Hypothetical protein. (117 aa)
PKB_1863Hypothetical secreted protein. (92 aa)
PKB_1864Hypothetical protein. (202 aa)
PKB_1879Hypothetical protein. (186 aa)
PKB_1880Hypothetical membrane protein. (106 aa)
PKB_1881Isochorismatase family hydrolase. (198 aa)
PKB_1898Hypothetical protein. (247 aa)
PKB_1899Amidohydrolase. (585 aa)
PKB_1928Hypothetical protein. (94 aa)
xylS3XylDLEGF operon transcriptional activator 3. (317 aa)
PKB_2124Hypothetical protein. (157 aa)
PKB_2125Conserved hypothetical protein. (147 aa)
PKB_2126AraC family transcriptional regulator. (322 aa)
PKB_2128DNA-binding domain-containing protein, AraC-type. (322 aa)
PKB_2129Hypothetical protein. (177 aa)
PKB_2130Hypothetical protein. (90 aa)
PKB_2131Type 11 methyltransferase. (270 aa)
PKB_2195Hypothetical protein. (368 aa)
PKB_2201Amidohydrolase. (612 aa)
PKB_2202Antibiotic biosynthesis monooxygenase domain-containing protein. (180 aa)
PKB_2203Nicotinamidase-like amidase. (218 aa)
PKB_2204Alpha/beta hydrolase domain-containing protein. (338 aa)
PKB_2205Conserved hypothetical protein. (133 aa)
PKB_2263AraC family transcriptional regulator. (328 aa)
PKB_2264Metal dependent phosphohydrolase. (213 aa)
PKB_2265Metal-dependent phosphohydrolase, HD subdomain. (216 aa)
PKB_2297Methyltransferase type 11. (265 aa)
PKB_2303GntR family transcriptional regulator. (506 aa)
PKB_2304NADH dehydrogenase-like protein Rv1812c/MT1860. (401 aa)
PKB_2305Hypothetical protein. (215 aa)
PKB_2314DNA-binding domain-containing protein, AraC-type. (326 aa)
PKB_2467Hypothetical protein. (75 aa)
PKB_2468Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (203 aa)
PKB_2469AraC family transcriptional regulator. (319 aa)
PKB_2470Hypothetical protein. (102 aa)
PKB_2471Conserved hypothetical protein. (150 aa)
PKB_2472Conserved hypothetical protein. (128 aa)
PKB_2577Patatin. (403 aa)
PKB_2579Hypothetical protein. (50 aa)
PKB_2580Peptidase C45. (359 aa)
PKB_2585Isochorismatase hydrolase. (196 aa)
PKB_2586Hypothetical protein. (355 aa)
PKB_2652Uncharacterized HTH-type transcriptional regulator ydeL. (480 aa)
PKB_2653Hypothetical protein. (139 aa)
feaRDNA-binding Transcriptional activator. (305 aa)
PKB_2765Hypothetical protein. (155 aa)
PKB_2802Conserved hypothetical protein. (129 aa)
PKB_2815AraC family transcriptional regulator. (302 aa)
PKB_2832AraC family transcriptional regulator. (271 aa)
PKB_2833Hypothetical protein. (295 aa)
PKB_2838Alkylhydroperoxidase AhpD family core domain containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (146 aa)
yvaGUncharacterized oxidoreductase yvaG. (262 aa)
PKB_2891Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (144 aa)
PKB_2953Conserved hypothetical protein. (137 aa)
PKB_2954DGPFAETKE family protein. (141 aa)
PKB_29773-demethylubiquinone-9 3-methyltransferase. (166 aa)
PKB_3055Hypothetical protein. (114 aa)
PKB_3088Putative transcriptional regulator. (174 aa)
PKB_3089Nicotinamidase-like amidase. (208 aa)
PKB_3090NAD-dependent aldehyde dehydrogenase. (521 aa)
PKB_3168Hypothetical protein. (241 aa)
PKB_3169Methyltransferase type 11. (208 aa)
PKB_3322Transcriptional regulator. (322 aa)
PKB_3323Hydrolase. (265 aa)
PKB_3325AraC family transcriptional regulator. (269 aa)
PKB_3489Hypothetical protein. (89 aa)
PKB_3490Transcriptional regulator. (336 aa)
PKB_3491Hypothetical protein. (80 aa)
PKB_3492Hypothetical protein. (394 aa)
PKB_3498Putative tranmembrane protein. (194 aa)
PKB_3499Transcriptional regulator, AraC family. (278 aa)
PKB_3500Translocator protein, LysE family. (202 aa)
PKB_3587AraC family transcriptional regulator. (267 aa)
PKB_3656Hypothetical protein. (405 aa)
PKB_3657Hypothetical protein. (156 aa)
PKB_3658Hypothetical protein. (78 aa)
PKB_3967DNA-binding domain-containing protein, AraC-type. (256 aa)
PKB_3968Hypothetical membrane protein. (57 aa)
blaPBeta-lactamase. (296 aa)
PKB_4039Putative transcriptional regulator. (317 aa)
PKB_4040Hypothetical protein. (209 aa)
PKB_4081Transcriptional regulator. (254 aa)
PKB_4153Putative transcriptional regulator. (287 aa)
PKB_4154Hypothetical protein. (189 aa)
mmsr1MmsAB operon regulatory protein. (293 aa)
PKB_4191Hypothetical protein. (213 aa)
PKB_4282DNA-binding domain-containing protein, AraC-type. (259 aa)
PKB_4296Hypothetical protein. (120 aa)
PKB_4297Hypothetical protein. (531 aa)
PKB_4298Hypothetical protein. (613 aa)
PKB_4299Arylesterase. (272 aa)
PKB_4300Antibiotic biosynthesis monooxygenase. (189 aa)
PKB_4301Putative ATPase. (459 aa)
PKB_4302AraC family transcriptional regulator. (318 aa)
PKB_4303Nicotinamidase-like amidase. (218 aa)
PKB_4304Hypothetical membrane protein. (143 aa)
oprd11Porin D. (423 aa)
PKB_4325Hypothetical protein. (96 aa)
thcFNon-heme haloperoxidase. (325 aa)
PKB_4375Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain. (337 aa)
PKB_4448Hypothetical protein; Belongs to the sigma-70 factor family. (415 aa)
PKB_4449Hypothetical protein. (142 aa)
PKB_4450Hypothetical protein. (260 aa)
PKB_4451Hypothetical protein. (42 aa)
PKB_4452Conserved hypothetical protein. (123 aa)
PKB_4544Hypothetical protein. (332 aa)
PKB_4658DNA-binding domain-containing protein, AraC-type. (253 aa)
PKB_4677Hypothetical protein. (133 aa)
mmsr3MmsAB operon regulatory protein. (297 aa)
PKB_4951Transcriptional regulator. (321 aa)
PKB_4952Putative transcriptional regulator. (364 aa)
PKB_5150Hypothetical protein; Belongs to the arylamine N-acetyltransferase family. (279 aa)
PKB_5151Hypothetical protein. (159 aa)
PKB_5152dTDP-glucose 4,6-dehydratase. (244 aa)
PKB_5153NADPH-dependent FMN reductase. (186 aa)
PKB_5326Hypothetical protein. (148 aa)
PKB_5327Hypothetical protein. (131 aa)
PKB_5587Penicilin amidase. (795 aa)
PKB_5673Putative transcriptional regulator. (266 aa)
PKB_5674Ketopantoate reductase ApbA/PanE domain-containing protein. (285 aa)
PKB_5675Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (310 aa)
recGATP-dependent DNA helicase recG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (691 aa)
PKB_5757Putative transcriptional regulator. (313 aa)
Your Current Organism:
Pseudomonas knackmussii
NCBI taxonomy Id: 1301098
Other names: P. knackmussii B13, Pseudomonas knackmussii B13, Pseudomonas knackmussii LMG 23759, Pseudomonas sp. (strain B13), Pseudomonas sp. B13, Pseudomonas sp. DSM 6978
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