STRINGSTRING
PKB_0093 PKB_0093 cheB2 cheB2 PKB_0116 PKB_0116 PKB_0118 PKB_0118 dctd1 dctd1 czcR czcR PKB_0301 PKB_0301 algR algR pilG pilG pilH pilH PKB_0433 PKB_0433 creB creB PKB_0553 PKB_0553 PKB_0790 PKB_0790 PKB_0791 PKB_0791 PKB_0793 PKB_0793 cheB2-2 cheB2-2 PKB_0801 PKB_0801 narL narL PKB_1107 PKB_1107 PKB_1150 PKB_1150 cheB3 cheB3 PKB_1152 PKB_1152 erdR erdR gacS gacS PKB_1354 PKB_1354 tctD tctD PKB_1634 PKB_1634 PKB_1654 PKB_1654 flbD flbD PKB_1669 PKB_1669 cheY cheY cheB1 cheB1 PKB_1727 PKB_1727 PKB_1729 PKB_1729 PKB_1733 PKB_1733 PKB_1756 PKB_1756 phoP phoP PKB_1826 PKB_1826 PKB_1845 PKB_1845 kdpe1 kdpe1 PKB_1969 PKB_1969 PKB_2062 PKB_2062 PKB_2077 PKB_2077 PKB_2096 PKB_2096 PKB_2215 PKB_2215 PKB_2216 PKB_2216 PKB_2293 PKB_2293 PKB_2299 PKB_2299 PKB_2492 PKB_2492 PKB_2493 PKB_2493 PKB_2513 PKB_2513 PKB_2679 PKB_2679 PKB_2680 PKB_2680 PKB_2769 PKB_2769 agmR agmR PKB_2790 PKB_2790 PKB_2817 PKB_2817 PKB_3023 PKB_3023 ompR_2 ompR_2 kdpe3 kdpe3 PKB_3126 PKB_3126 gacA gacA qseb1 qseb1 PKB_3409 PKB_3409 PKB_3433 PKB_3433 copR copR PKB_3640 PKB_3640 PKB_3694 PKB_3694 PKB_3714 PKB_3714 cheV cheV bvgS bvgS bvgA bvgA ompr1 ompr1 PKB_3944 PKB_3944 PKB_4155 PKB_4155 nodW nodW PKB_4377 PKB_4377 PKB_4474 PKB_4474 PKB_4491 PKB_4491 PKB_4505 PKB_4505 PKB_4600 PKB_4600 pilR pilR PKB_4838 PKB_4838 PKB_4855 PKB_4855 dctd3 dctd3 zraR zraR PKB_4956 PKB_4956 qseb3 qseb3 PKB_5161 PKB_5161 PKB_5174 PKB_5174 PKB_5271 PKB_5271 glnG glnG dctd5 dctd5 ompr3 ompr3 phoB phoB PKB_5695 PKB_5695 algB algB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PKB_0093Two-component response regulator. (121 aa)
cheB2Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (348 aa)
PKB_0116Two-component response regulator. (245 aa)
PKB_0118Putative two-component sensor. (734 aa)
dctd1C4-dicarboxylate transport transcriptional regulatory protein dctD. (444 aa)
czcRTranscriptional activator protein CzcR. (224 aa)
PKB_0301Hypothetical protein. (422 aa)
algRPositive alginate biosynthesis regulatory protein. (248 aa)
pilGProtein pilG. (135 aa)
pilHProtein pilH. (121 aa)
PKB_0433Response regulator. (949 aa)
creBTranscriptional regulatory protein CreB. (227 aa)
PKB_0553LuxR family transcriptional regulator. (209 aa)
PKB_0790Hypothetical protein. (485 aa)
PKB_0791Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (213 aa)
PKB_0793Response regulator with CheY-like receiver,AAA-type ATPase, and DNA-binding domains. (122 aa)
cheB2-2Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (352 aa)
PKB_0801EAL domain-containing protein. (412 aa)
narLNitrate/nitrite response regulator protein NarL. (217 aa)
PKB_1107Putative two-component response regulator. (217 aa)
PKB_1150Chemotaxis sensor/effector fusion protein. (762 aa)
cheB3Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (335 aa)
PKB_1152Two-component response regulator. (340 aa)
erdRResponse regulator ErdR. (216 aa)
gacSSensor protein gacS. (923 aa)
PKB_1354Two-component response regulator. (217 aa)
tctDTranscriptional regulatory protein tctD. (223 aa)
PKB_1634Chemotaxis protein. (310 aa)
PKB_1654Transcriptional regulator FleQ. (491 aa)
flbDTranscriptional regulatory protein flbD. (474 aa)
PKB_1669Two-component response regulator. (225 aa)
cheYChemotaxis protein CheY. (123 aa)
cheB1Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (368 aa)
PKB_1727Hypothetical protein. (336 aa)
PKB_1729Hypothetical protein. (216 aa)
PKB_1733Hypothetical protein. (126 aa)
PKB_1756Two-component response regulator. (233 aa)
phoPVirulence transcriptional regulatory protein phoP. (225 aa)
PKB_1826Putative sensor/response regulator hybrid. (639 aa)
PKB_1845DNA-binding response regulator, OmpR family. (252 aa)
kdpe1KDP operon transcriptional regulatory protein KdpE. (250 aa)
PKB_1969Response regulator receiver/ANTAR domain-containing protein. (192 aa)
PKB_2062Hypothetical protein. (255 aa)
PKB_2077Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. (180 aa)
PKB_2096Response regulator with CheY-like receiver,AAA-type ATPase, and DNA-binding domains. (471 aa)
PKB_2215Response regulator. (241 aa)
PKB_2216Two component transcriptional regulator. (230 aa)
PKB_2293Two component transcriptional regulator. (244 aa)
PKB_2299Response regulator receiver protein. (210 aa)
PKB_2492PAS domain S-box. (1494 aa)
PKB_2493Diguanylate cyclase (GGDEF) domain-containing protein. (563 aa)
PKB_2513Two component, sigma54 specific, Fis family transcriptional regulator. (462 aa)
PKB_2679Putative response regulator. (382 aa)
PKB_2680Putative sensory box histidine kinase/response regulator. (1456 aa)
PKB_2769Putative two-component sensor. (860 aa)
agmRGlycerol metabolism activator. (221 aa)
PKB_2790Putative two-component sensor. (563 aa)
PKB_2817Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain. (221 aa)
PKB_3023Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain. (227 aa)
ompR_2OmpR_2. (246 aa)
kdpe3KDP operon transcriptional regulatory protein KdpE. (230 aa)
PKB_3126Hypothetical protein. (1198 aa)
gacAResponse regulator gacA. (214 aa)
qseb1Transcriptional regulatory protein qseB. (220 aa)
PKB_3409Putative two-component response regulator. (225 aa)
PKB_3433Putative two-component response regulator. (394 aa)
copRTranscriptional activator protein CopR. (226 aa)
PKB_3640Sensor histidine kinase/response regulator. (774 aa)
PKB_3694Putative two-component response regulator. (320 aa)
PKB_3714Transcriptional regulator. (211 aa)
cheVChemotaxis protein CheV. (309 aa)
bvgSVirulence sensor protein BvgS. (1237 aa)
bvgAVirulence factors putative positive transcription regulator BvgA. (208 aa)
ompr1Transcriptional regulatory protein OmpR. (244 aa)
PKB_3944Two-component response regulator. (566 aa)
PKB_4155Hypothetical protein. (1159 aa)
nodWNodulation protein W. (220 aa)
PKB_4377Hypothetical protein. (129 aa)
PKB_4474Two-component response regulator, PprB. (275 aa)
PKB_4491Two-component response regulator. (227 aa)
PKB_4505Response regulator receiver modulated diguanylate cyclase. (321 aa)
PKB_4600Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. (186 aa)
pilRType 4 fimbriae expression regulatory protein pilR. (445 aa)
PKB_4838Hypothetical protein. (144 aa)
PKB_4855Response regulator receiver protein. (390 aa)
dctd3C4-dicarboxylate transport transcriptional regulatory protein dctD. (441 aa)
zraRTranscriptional regulatory protein ZraR. (479 aa)
PKB_4956Hypothetical protein. (202 aa)
qseb3Transcriptional regulatory protein qseB. (224 aa)
PKB_5161Putative two-component response regulator. (539 aa)
PKB_5174Signal transduction histidine kinase. (934 aa)
PKB_5271Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. (690 aa)
glnGNitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (476 aa)
dctd5C4-dicarboxylate transport transcriptional regulatory protein dctD. (464 aa)
ompr3Transcriptional regulatory protein OmpR. (246 aa)
phoBPhosphate regulon transcriptional regulatory protein phoB. (229 aa)
PKB_5695Putative two-component response regulator. (298 aa)
algBAlginate biosynthesis transcriptional regulatory protein AlgB. (448 aa)
Your Current Organism:
Pseudomonas knackmussii
NCBI taxonomy Id: 1301098
Other names: P. knackmussii B13, Pseudomonas knackmussii B13, Pseudomonas knackmussii LMG 23759, Pseudomonas sp. (strain B13), Pseudomonas sp. B13, Pseudomonas sp. DSM 6978
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