STRINGSTRING
AIJ05058.1 AIJ05058.1 AIJ05059.1 AIJ05059.1 AIJ05060.1 AIJ05060.1 AIJ05061.1 AIJ05061.1 AIJ05062.1 AIJ05062.1 AIJ05063.1 AIJ05063.1 AIJ05064.1 AIJ05064.1 AIJ05065.1 AIJ05065.1 AIJ05066.1 AIJ05066.1 AIJ05067.1 AIJ05067.1 AIJ05069.1 AIJ05069.1 AIJ05070.1 AIJ05070.1 AIJ05071.1 AIJ05071.1 AIJ05072.1 AIJ05072.1 AIJ05073.1 AIJ05073.1 AIJ05074.1 AIJ05074.1 AIJ05075.1 AIJ05075.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIJ05058.1Transcriptional regulator, XRE family. (212 aa)
AIJ05059.1Hypothetical protein; COG4042. (87 aa)
AIJ05060.1Hypothetical protein; COG4041. (164 aa)
AIJ05061.1Hypothetical protein. (81 aa)
AIJ05062.1Hypothetical protein; COG4039. (92 aa)
AIJ05063.1(NiFe)-hydrogenase-3-type complex Eha, EhaE; COG4038. (86 aa)
AIJ05064.1Hypothetical protein; COG4037. (153 aa)
AIJ05065.1Hypothetical protein; COG4036. (231 aa)
AIJ05066.1NADH dehydrogenase I; COG4078. (218 aa)
AIJ05067.1NADH dehydrogenase subunit; COG0650. (292 aa)
AIJ05069.1Hypothetical protein; COG4035. (95 aa)
AIJ05070.1(NiFe)-hydrogenase-3-type complex Eha, EhaM; COG4084. (138 aa)
AIJ05071.1NADH-ubiquinone oxidoreductase chain small subunit, type 1; COG3260. (148 aa)
AIJ05072.1NADH-ubiquinone oxidoreductase chain large subunit, type 1; COG3261; Belongs to the complex I 49 kDa subunit family. (377 aa)
AIJ05073.1Polyferredoxin. (405 aa)
AIJ05074.14Fe-4S ferredoxin iron-sulfur binding domain protein. (163 aa)
AIJ05075.14Fe-4S ferredoxin iron-sulfur binding domain protein; COG1145. (250 aa)
Your Current Organism:
Methanocaldococcus bathoardescens
NCBI taxonomy Id: 1301915
Other names: DSM 27223, KACC 18232, M. bathoardescens, Methanocaldococcus bathoardescens Stewart et al. 2015, Methanocaldococcus sp. JH146, strain JH146
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