STRINGSTRING
AIJ05058.1 AIJ05058.1 AIJ05059.1 AIJ05059.1 AIJ05060.1 AIJ05060.1 AIJ05061.1 AIJ05061.1 AIJ05062.1 AIJ05062.1 AIJ05063.1 AIJ05063.1 AIJ05064.1 AIJ05064.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIJ05058.1Transcriptional regulator, XRE family. (212 aa)
AIJ05059.1Hypothetical protein; COG4042. (87 aa)
AIJ05060.1Hypothetical protein; COG4041. (164 aa)
AIJ05061.1Hypothetical protein. (81 aa)
AIJ05062.1Hypothetical protein; COG4039. (92 aa)
AIJ05063.1(NiFe)-hydrogenase-3-type complex Eha, EhaE; COG4038. (86 aa)
AIJ05064.1Hypothetical protein; COG4037. (153 aa)
Your Current Organism:
Methanocaldococcus bathoardescens
NCBI taxonomy Id: 1301915
Other names: DSM 27223, KACC 18232, M. bathoardescens, Methanocaldococcus bathoardescens Stewart et al. 2015, Methanocaldococcus sp. JH146, strain JH146
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