STRINGSTRING
AIJ04912.1 AIJ04912.1 AIJ04913.1 AIJ04913.1 AIJ04914.1 AIJ04914.1 AIJ04915.1 AIJ04915.1 AIJ04916.1 AIJ04916.1 AIJ06302.1 AIJ06302.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIJ04912.1Hypothetical protein. (141 aa)
AIJ04913.1Phosphoesterase RecJ domain protein; COG0608. (313 aa)
AIJ04914.1Hypothetical protein. (157 aa)
AIJ04915.1Glycosyl transferase family protein; COG0859. (372 aa)
AIJ04916.1Glycosyl transferase family protein; COG0859. (345 aa)
AIJ06302.1Hypothetical protein; COG0859. (340 aa)
Your Current Organism:
Methanocaldococcus bathoardescens
NCBI taxonomy Id: 1301915
Other names: DSM 27223, KACC 18232, M. bathoardescens, Methanocaldococcus bathoardescens Stewart et al. 2015, Methanocaldococcus sp. JH146, strain JH146
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