Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIJ04854.1 | AIJ05497.1 | JH146_0003 | JH146_0648 | CO dehydrogenase/acetyl-CoA synthase epsilon subunit; COG1880. | Formylmethanofuran dehydrogenase subunit B; COG1029. | 0.714 |
| AIJ04854.1 | AIJ05520.1 | JH146_0003 | JH146_0671 | CO dehydrogenase/acetyl-CoA synthase epsilon subunit; COG1880. | Formylmethanofuran dehydrogenase subunit C; COG2218. | 0.650 |
| AIJ04854.1 | AIJ05523.1 | JH146_0003 | JH146_0674 | CO dehydrogenase/acetyl-CoA synthase epsilon subunit; COG1880. | Formylmethanofuran dehydrogenase subunit D; COG1153. | 0.849 |
| AIJ04854.1 | AIJ05524.1 | JH146_0003 | JH146_0675 | CO dehydrogenase/acetyl-CoA synthase epsilon subunit; COG1880. | Formylmethanofuran dehydrogenase subunit G; COG1145. | 0.766 |
| AIJ04854.1 | AIJ06259.1 | JH146_0003 | JH146_1417 | CO dehydrogenase/acetyl-CoA synthase epsilon subunit; COG1880. | Formylmethanofuran dehydrogenase subunit B; COG1029. | 0.739 |
| AIJ04854.1 | AIJ06261.1 | JH146_0003 | JH146_1419 | CO dehydrogenase/acetyl-CoA synthase epsilon subunit; COG1880. | Formylmethanofuran dehydrogenase subunit C; COG2218. | 0.650 |
| AIJ04854.1 | mtrH | JH146_0003 | JH146_1047 | CO dehydrogenase/acetyl-CoA synthase epsilon subunit; COG1880. | Tetrahydromethanopterin S-methyltransferase, subunit H; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of MtrA. | 0.438 |
| AIJ05017.1 | AIJ05353.1 | JH146_0166 | JH146_0503 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. | 0.595 |
| AIJ05017.1 | AIJ05354.1 | JH146_0166 | JH146_0504 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase, gamma subunit; COG4057. | 0.620 |
| AIJ05017.1 | AIJ05355.1 | JH146_0166 | JH146_0505 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase, beta subunit; COG4054. | 0.555 |
| AIJ05017.1 | AIJ05394.1 | JH146_0166 | JH146_0545 | Mur ligase middle domain protein; COG0770. | Vanadium nitrogenase-associated protein N; COG2710. | 0.983 |
| AIJ05017.1 | AIJ05596.1 | JH146_0166 | JH146_0749 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase operon protein D; COG4055. | 0.571 |
| AIJ05017.1 | AIJ05899.1 | JH146_0166 | JH146_1056 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. | 0.596 |
| AIJ05017.1 | AIJ05900.1 | JH146_0166 | JH146_1057 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase, gamma subunit; COG4057. | 0.619 |
| AIJ05017.1 | AIJ05901.1 | JH146_0166 | JH146_1058 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase operon protein C; COG4056. | 0.572 |
| AIJ05017.1 | AIJ05902.1 | JH146_0166 | JH146_1059 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase operon protein D; COG4055. | 0.621 |
| AIJ05017.1 | AIJ05903.1 | JH146_0166 | JH146_1060 | Mur ligase middle domain protein; COG0770. | Methyl-coenzyme M reductase, beta subunit; COG4054. | 0.568 |
| AIJ05017.1 | cbiA | JH146_0166 | JH146_0542 | Mur ligase middle domain protein; COG0770. | Cobyrinic acid a,c-diamide synthase CobB; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source. | 0.482 |
| AIJ05017.1 | cbiX | JH146_0166 | JH146_1257 | Mur ligase middle domain protein; COG0770. | Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the insertion of Ni(2+) into sirohydrochlorin to yield Ni- sirohydrochlorin. | 0.556 |
| AIJ05353.1 | AIJ05017.1 | JH146_0503 | JH146_0166 | Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. | Mur ligase middle domain protein; COG0770. | 0.595 |
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