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atpD atpD AIJ06238.1 AIJ06238.1 AIJ06422.1 AIJ06422.1 atpC atpC atpB atpB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atpDV-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (216 aa)
AIJ06238.1Hypothetical protein; COG1422. (198 aa)
AIJ06422.1V-type ATP synthase subunit I; COG1269; Belongs to the V-ATPase 116 kDa subunit family. (671 aa)
atpCV-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane. (399 aa)
atpBV-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (420 aa)
Your Current Organism:
Methanocaldococcus bathoardescens
NCBI taxonomy Id: 1301915
Other names: DSM 27223, KACC 18232, M. bathoardescens, Methanocaldococcus bathoardescens Stewart et al. 2015, Methanocaldococcus sp. JH146, strain JH146
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