STRINGSTRING
AFZ52041.1 AFZ52041.1 AFZ52028.1 AFZ52028.1 AFZ52022.1 AFZ52022.1 AFZ52006.1 AFZ52006.1 ndhK ndhK AFZ51625.1 AFZ51625.1 ispG ispG AFZ51514.1 AFZ51514.1 AFZ51496.1 AFZ51496.1 AFZ51494.1 AFZ51494.1 AFZ51440.1 AFZ51440.1 cofH cofH AFZ51345.1 AFZ51345.1 petJ petJ ndhI ndhI tsaD tsaD psbF psbF psbE psbE AFZ50655.1 AFZ50655.1 acsF acsF psbA-2 psbA-2 AFZ50343.1 AFZ50343.1 psbD-2 psbD-2 AFZ50234.1 AFZ50234.1 AFZ49993.1 AFZ49993.1 psbV psbV bioB bioB AFZ49641.1 AFZ49641.1 psbA psbA psbD psbD cofG cofG petA petA acsF-2 acsF-2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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co-expression
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Your Input:
AFZ52041.1Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH). (300 aa)
AFZ52028.1Ring-hydroxylating dioxygenase, large terminal subunit; PFAM: Rieske [2Fe-2S] domain. (364 aa)
AFZ52022.1Ferredoxin. (144 aa)
AFZ52006.1Thioredoxin-like protein; PFAM: NifU-like domain. (82 aa)
ndhKNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family. (250 aa)
AFZ51625.1Sterol desaturase; PFAM: Fatty acid hydroxylase superfamily; manually curated. (165 aa)
ispG1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (407 aa)
AFZ51514.1Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c. (145 aa)
AFZ51496.1PFAM: Cytochrome P450. (452 aa)
AFZ51494.1PFAM: Cytochrome P450. (466 aa)
AFZ51440.1DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family. (165 aa)
cofHRadical SAM domain protein, CofH subfamily; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine. (385 aa)
AFZ51345.1Hypothetical protein. (386 aa)
petJCytochrome c, mono- and diheme variants family; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (105 aa)
ndhINADH-plastoquinone oxidoreductase subunit I protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 23 kDa subunit family. (210 aa)
tsaDPutative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (348 aa)
psbFCytochrome b559, beta subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (44 aa)
psbECytochrome b559, alpha subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (81 aa)
AFZ50655.1PFAM: Rubredoxin; Belongs to the rubredoxin family. (115 aa)
acsFMagnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. (351 aa)
psbA-2Photosystem II DI subunit, Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
AFZ50343.1PFAM: Cytochrome P450. (461 aa)
psbD-2Photosystem II DII subunit, Q(A) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII c [...] (353 aa)
AFZ50234.1Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Fatty acid hydroxylase superfamily. (395 aa)
AFZ49993.1PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)). (360 aa)
psbVCytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. (163 aa)
bioBBiotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (343 aa)
AFZ49641.1DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family. (184 aa)
psbAPhotosystem II DI subunit, Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
psbDPhotosystem II DII subunit, Q(A) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII c [...] (353 aa)
cofG7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil. (315 aa)
petAApocytochrome F, C-terminal; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (328 aa)
acsF-2Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. (358 aa)
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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