STRINGSTRING
PHSY_004857 PHSY_004857 PHSY_000766 PHSY_000766 UNG1 UNG1 PHSY_001021 PHSY_001021 PHSY_001910 PHSY_001910 PHSY_003087 PHSY_003087 PHSY_003167 PHSY_003167 PHSY_004113 PHSY_004113 PHSY_004525 PHSY_004525 PHSY_001911 PHSY_001911 PHSY_005690 PHSY_005690 FEN1 FEN1 PHSY_006522 PHSY_006522 PHSY_006964 PHSY_006964 PHSY_007232 PHSY_007232 NTH1 NTH1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHSY_004857DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2300 aa)
PHSY_000766DNA ligase. (1078 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (547 aa)
PHSY_001021DNA repair protein. (359 aa)
PHSY_001910DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (147 aa)
PHSY_003087ENDO3c domain-containing protein. (442 aa)
PHSY_003167DNA lyase. (608 aa)
PHSY_004113DNA polymerase. (1057 aa)
PHSY_004525DNA repair protein. (612 aa)
PHSY_001911DNA lyase. (308 aa)
PHSY_005690UDG domain-containing protein. (493 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (374 aa)
PHSY_006522DNA ligase. (847 aa)
PHSY_006964DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (743 aa)
PHSY_007232Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (603 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (546 aa)
Your Current Organism:
Pseudozyma hubeiensis
NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62
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