36 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_004345	Glycosyltransferase. (668 aa)
	PHSY_000014	Phosphatidylinositol phosphate kinase. (1022 aa)
	PHSY_001003	Inositol-1-monophosphatase. (326 aa)
	PHSY_001404	Phosphoethanolamine N-methyltransferase. (1301 aa)
	PHSY_001698	SAC domain-containing protein. (1180 aa)
	PHSY_001872	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2178 aa)
	PHSY_002182	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. (404 aa)
	PHSY_002451	Uncharacterized protein. (331 aa)
	PHSY_002481	Mannosyltransferase. (649 aa)
	PHSY_002450	Uncharacterized protein. (221 aa)
	PHSY_002692	PIPK domain-containing protein. (2706 aa)
	PHSY_002858	GPI-anchored wall transfer protein 1. (763 aa)
	PHSY_003119	GPI mannosyltransferase. (377 aa)
	PHSY_002995	GPI ethanolamine phosphate transferase. (1204 aa)
	PHSY_002998	Phosphatidylinositol 3-kinase VPS34. (971 aa)
	PHSY_003173	Glycan biosynthesis protein. (384 aa)
	PHSY_003529	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1270 aa)
	PHSY_003585	CHK domain-containing protein. (303 aa)
	PHSY_000591	Glycosyltransferase. (458 aa)
	PHSY_003884	Uncharacterized protein. (407 aa)
	PHSY_001025	Potential GPI-protein transamidase complex subunit. (734 aa)
	PHSY_004556	Vacuole-associated enzyme activator complex component Vac14. (1126 aa)
	PHSY_005179	Glycerol uptake protein 1; Belongs to the membrane-bound acyltransferase family. (624 aa)
	PHSY_005093	Uncharacterized protein. (2026 aa)
	PHSY_005642	Uncharacterized protein. (1576 aa)
	PHSY_005705	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. (333 aa)
	PHSY_005722	Phosphatidylinositol 3-and 4-kinase. (926 aa)
	PHSY_006056	Uncharacterized protein. (624 aa)
	PHSY_006374	Glycosylphosphatidylinositol anchor biosynthesis protein 11. (320 aa)
	PHSY_006583	Kinase; Belongs to the inositol phosphokinase (IPK) family. (1612 aa)
	PHSY_006502	SAC domain-containing protein. (1500 aa)
	PHSY_006905	Uncharacterized protein. (2823 aa)
	PHSY_006970	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (278 aa)
	PHSY_007005	Cell division cycle protein 91. (548 aa)
	PHSY_003985	Uncharacterized protein. (695 aa)
	PHSY_004379	Uncharacterized protein. (704 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHSY_000014	PHSY_001698	R9NVM3	R9NZD4	Phosphatidylinositol phosphate kinase.	SAC domain-containing protein.	0.936
PHSY_000014	PHSY_001872	R9NVM3	R9NZR8	Phosphatidylinositol phosphate kinase.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.959
PHSY_000014	PHSY_002692	R9NVM3	R9P1S7	Phosphatidylinositol phosphate kinase.	PIPK domain-containing protein.	0.667
PHSY_000014	PHSY_002998	R9NVM3	R9P2J0	Phosphatidylinositol phosphate kinase.	Phosphatidylinositol 3-kinase VPS34.	0.523
PHSY_000014	PHSY_003529	R9NVM3	R9P3L7	Phosphatidylinositol phosphate kinase.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.950
PHSY_000014	PHSY_005722	R9NVM3	R9P9R8	Phosphatidylinositol phosphate kinase.	Phosphatidylinositol 3-and 4-kinase.	0.930
PHSY_000014	PHSY_006905	R9NVM3	R9PD73	Phosphatidylinositol phosphate kinase.	Uncharacterized protein.	0.667
PHSY_000591	PHSY_001025	R9P4J8	R9P5T7	Glycosyltransferase.	Potential GPI-protein transamidase complex subunit.	0.474
PHSY_000591	PHSY_001404	R9P4J8	R9NYQ6	Glycosyltransferase.	Phosphoethanolamine N-methyltransferase.	0.618
PHSY_000591	PHSY_002182	R9P4J8	R9P0I0	Glycosyltransferase.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.607
PHSY_000591	PHSY_002450	R9P4J8	R9P1A6	Glycosyltransferase.	Uncharacterized protein.	0.910
PHSY_000591	PHSY_002451	R9P4J8	R9P0W9	Glycosyltransferase.	Uncharacterized protein.	0.910
PHSY_000591	PHSY_002995	R9P4J8	R9P2E3	Glycosyltransferase.	GPI ethanolamine phosphate transferase.	0.645
PHSY_000591	PHSY_003119	R9P4J8	R9P2C5	Glycosyltransferase.	GPI mannosyltransferase.	0.766
PHSY_000591	PHSY_003173	R9P4J8	R9P2W8	Glycosyltransferase.	Glycan biosynthesis protein.	0.948
PHSY_000591	PHSY_003585	R9P4J8	R9P3R8	Glycosyltransferase.	CHK domain-containing protein.	0.816
PHSY_000591	PHSY_004379	R9P4J8	R9PFE4	Glycosyltransferase.	Uncharacterized protein.	0.959
PHSY_000591	PHSY_005642	R9P4J8	R9P9M7	Glycosyltransferase.	Uncharacterized protein.	0.548
PHSY_000591	PHSY_005705	R9P4J8	R9P9R6	Glycosyltransferase.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.661
PHSY_000591	PHSY_006970	R9P4J8	R9PDD3	Glycosyltransferase.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.883