25 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_007437	Topoisomerase acting in meiosis. (299 aa)
	PHSY_006802	Potential translation-regulating helicase. (948 aa)
	PHSY_006654	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (339 aa)
	PHSY_003442	Uncharacterized protein. (1055 aa)
	PHSY_002930	AAA domain-containing protein; Belongs to the AAA ATPase family. (532 aa)
	PHSY_006302	Uncharacterized protein. (846 aa)
	PHSY_002775	Single-stranded DNA endonuclease. (992 aa)
	PHSY_005858	Likely protein kinase. (812 aa)
	PHSY_004956	DNA mismatch repair protein. (1023 aa)
	PHSY_004508	Likely protein kinase. (940 aa)
	PHSY_004522	Uncharacterized protein. (407 aa)
	PHSY_000865	Meiotic recombination-related protein. (395 aa)
	PHSY_000677	Uncharacterized protein. (868 aa)
	PHSY_003357	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (793 aa)
	PHSY_002351	Nuclease. (601 aa)
	PHSY_001366	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1523 aa)
	PHSY_001006	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (992 aa)
	PHSY_000864	DNA mismatch repair protein. (183 aa)
	PHSY_000863	DNA_MISMATCH_REPAIR_2 domain-containing protein. (182 aa)
	PHSY_000547	ERCC4 domain-containing protein. (851 aa)
	PHSY_000590	DUF1767 domain-containing protein. (468 aa)
	PHSY_000556	DNA_mis_repair domain-containing protein. (831 aa)
	PHSY_000019	Uncharacterized protein. (334 aa)
	PHSY_000072	DNA helicase I. (1145 aa)
	PHSY_000067	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (644 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHSY_000019	PHSY_006302	R9NVM6	R9PBC2	Uncharacterized protein.	Uncharacterized protein.	0.451
PHSY_000019	PHSY_006654	R9NVM6	R9PCT6	Uncharacterized protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.789
PHSY_000072	PHSY_000556	R9NVK7	R9NWU0	DNA helicase I.	DNA_mis_repair domain-containing protein.	0.585
PHSY_000072	PHSY_000590	R9NVK7	R9NWU8	DNA helicase I.	DUF1767 domain-containing protein.	0.514
PHSY_000072	PHSY_000677	R9NVK7	R9P4S5	DNA helicase I.	Uncharacterized protein.	0.598
PHSY_000072	PHSY_001006	R9NVK7	R9NXV4	DNA helicase I.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.667
PHSY_000072	PHSY_001366	R9NVK7	R9NYN7	DNA helicase I.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.468
PHSY_000072	PHSY_002351	R9NVK7	R9P0P0	DNA helicase I.	Nuclease.	0.711
PHSY_000072	PHSY_002775	R9NVK7	R9PAT2	DNA helicase I.	Single-stranded DNA endonuclease.	0.481
PHSY_000072	PHSY_003442	R9NVK7	R9PCT4	DNA helicase I.	Uncharacterized protein.	0.598
PHSY_000072	PHSY_006302	R9NVK7	R9PBC2	DNA helicase I.	Uncharacterized protein.	0.700
PHSY_000072	PHSY_006654	R9NVK7	R9PCT6	DNA helicase I.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.906
PHSY_000547	PHSY_001006	R9NWW3	R9NXV4	ERCC4 domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.406
PHSY_000547	PHSY_002351	R9NWW3	R9P0P0	ERCC4 domain-containing protein.	Nuclease.	0.851
PHSY_000547	PHSY_002775	R9NWW3	R9PAT2	ERCC4 domain-containing protein.	Single-stranded DNA endonuclease.	0.562
PHSY_000547	PHSY_006654	R9NWW3	R9PCT6	ERCC4 domain-containing protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.405
PHSY_000556	PHSY_000072	R9NWU0	R9NVK7	DNA_mis_repair domain-containing protein.	DNA helicase I.	0.585
PHSY_000556	PHSY_000590	R9NWU0	R9NWU8	DNA_mis_repair domain-containing protein.	DUF1767 domain-containing protein.	0.433
PHSY_000556	PHSY_000863	R9NWU0	R9NXB1	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.827
PHSY_000556	PHSY_000864	R9NWU0	R9NXG3	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein.	0.827