67 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_000682	40S ribosomal protein S10. (157 aa)
	PHSY_000329	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (101 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (342 aa)
	PHSY_000395	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (261 aa)
	PHSY_000385	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (195 aa)
	PHSY_000377	Uncharacterized protein. (1853 aa)
	PHSY_000518	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	PHSY_000519	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (192 aa)
	PHSY_000836	60S ribosomal protein; Belongs to the universal ribosomal protein uL3 family. (346 aa)
	PHSY_000978	Uncharacterized protein. (113 aa)
	PHSY_001353	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (242 aa)
	PHSY_001329	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (136 aa)
	PHSY_001272	60S ribosomal protein. (279 aa)
	PHSY_001612	60S ribosomal protein. (210 aa)
	PHSY_001747	Ribosomal protein; Belongs to the universal ribosomal protein uL22 family. (214 aa)
	PHSY_001775	60S ribosomal protein; Belongs to the universal ribosomal protein uL23 family. (147 aa)
	PHSY_001822	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	PHSY_002346	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	PHSY_002356	60S ribosomal protein. (145 aa)
	PHSY_002349	Cytosolic ribosomal acidic protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
	PHSY_002347	60S ribosomal protein. (298 aa)
	PHSY_002669	60S ribosomal protein. (282 aa)
	PHSY_003514	40S ribosomal protein S26. (256 aa)
	PHSY_003445	60S ribosomal protein L28. (388 aa)
	PHSY_003921	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (195 aa)
	PHSY_004063	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (165 aa)
	PHSY_000773	40S ribosomal protein S19. (214 aa)
	PHSY_001045	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (246 aa)
	PHSY_004510	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (120 aa)
	PHSY_004588	Likely mitochondrial ribosomal protein L7. (358 aa)
	PHSY_004511	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (159 aa)
	PHSY_005054	LSU ribosomal protein L1E. (270 aa)
	PHSY_005085	60S ribosomal protein L13. (209 aa)
	PHSY_005127	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (504 aa)
	PHSY_005199	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (167 aa)
	PHSY_005200	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (125 aa)
	PHSY_002348	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (200 aa)
	PHSY_006052	Ribosomal protein L26. (129 aa)
	PHSY_006135	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (146 aa)
	PHSY_006016	60S ribosomal protein L37. (89 aa)
	PHSY_006225	WD_REPEATS_REGION domain-containing protein. (378 aa)
	PHSY_006292	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	PHSY_006293	60S ribosomal protein L21. (167 aa)
	PHSY_006303	Uncharacterized protein. (1045 aa)
	PHSY_006383	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (236 aa)
	PHSY_006615	60S ribosomal protein L13/L16. (204 aa)
	PHSY_006551	Ribosomal_L14e domain-containing protein. (135 aa)
	PHSY_006614	60S ribosomal protein L32. (130 aa)
	PHSY_006838	60S ribosomal protein L27/L28. (90 aa)
	PHSY_007115	60S ribosomal protein L35. (180 aa)
	PHSY_007043	Ribosomal protein L22. (125 aa)
	PHSY_007247	Topoisomerase II. (933 aa)
	PHSY_003920	40S ribosomal protein S27. (311 aa)
	PHSY_007380	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (205 aa)
	PHSY_004309	60S ribosomal protein L31. (127 aa)
	PHSY_004504	60S ribosomal protein L18. (335 aa)
	PHSY_005638	eIF2A domain-containing protein. (776 aa)
	PHSY_005784	Uncharacterized protein. (623 aa)
	PHSY_005862	Likely cytosolic ribosomal protein S20. (122 aa)
	PHSY_006224	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (221 aa)
	PHSY_007011	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (107 aa)
	PHSY_003029	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (253 aa)
	PHSY_003059	Ribosomal_L7Ae domain-containing protein. (369 aa)
	PHSY_003244	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (139 aa)
	PHSY_000048	ATPase components of ABC transporters with duplicated ATPase domains. (767 aa)
	PHSY_003335	40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (291 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (276 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHSY_000048	PHSY_000377	R9P317	R9NWG5	ATPase components of ABC transporters with duplicated ATPase domains.	Uncharacterized protein.	0.665
PHSY_000048	PHSY_000395	R9P317	R9NWA8	ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.702
PHSY_000048	PHSY_000518	R9P317	R9NWH3	ATPase components of ABC transporters with duplicated ATPase domains.	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.549
PHSY_000048	PHSY_000836	R9P317	R9NXI6	ATPase components of ABC transporters with duplicated ATPase domains.	60S ribosomal protein; Belongs to the universal ribosomal protein uL3 family.	0.577
PHSY_000048	PHSY_001272	R9P317	R9NYI6	ATPase components of ABC transporters with duplicated ATPase domains.	60S ribosomal protein.	0.708
PHSY_000048	PHSY_001329	R9P317	R9NYI3	ATPase components of ABC transporters with duplicated ATPase domains.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.531
PHSY_000048	PHSY_001747	R9P317	R9NZH3	ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein; Belongs to the universal ribosomal protein uL22 family.	0.548
PHSY_000048	PHSY_001775	R9P317	R9NZJ4	ATPase components of ABC transporters with duplicated ATPase domains.	60S ribosomal protein; Belongs to the universal ribosomal protein uL23 family.	0.709
PHSY_000048	PHSY_002347	R9P317	R9P0W2	ATPase components of ABC transporters with duplicated ATPase domains.	60S ribosomal protein.	0.711
PHSY_000048	PHSY_002348	R9P317	R9P9M2	ATPase components of ABC transporters with duplicated ATPase domains.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.705
PHSY_000048	PHSY_002669	R9P317	R9P1M4	ATPase components of ABC transporters with duplicated ATPase domains.	60S ribosomal protein.	0.549
PHSY_000048	PHSY_003335	R9P317	R9P385	ATPase components of ABC transporters with duplicated ATPase domains.	40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family.	0.563
PHSY_000048	PHSY_004511	R9P317	R9P6R6	ATPase components of ABC transporters with duplicated ATPase domains.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.532
PHSY_000048	PHSY_004588	R9P317	R9P6N9	ATPase components of ABC transporters with duplicated ATPase domains.	Likely mitochondrial ribosomal protein L7.	0.506
PHSY_000048	PHSY_005054	R9P317	R9P7U4	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L1E.	0.536
PHSY_000048	PHSY_005127	R9P317	R9P847	ATPase components of ABC transporters with duplicated ATPase domains.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.718
PHSY_000048	PHSY_005199	R9P317	R9P891	ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.532
PHSY_000048	PHSY_005862	R9P317	R9PJJ0	ATPase components of ABC transporters with duplicated ATPase domains.	Likely cytosolic ribosomal protein S20.	0.703
PHSY_000048	PHSY_006052	R9P317	R9PAN6	ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein L26.	0.696
PHSY_000048	PHSY_006225	R9P317	R9PB79	ATPase components of ABC transporters with duplicated ATPase domains.	WD_REPEATS_REGION domain-containing protein.	0.406