117 items (Pseudozyma hubeiensis) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	PHSY_003054	60S ribosomal protein. (208 aa)
	PHSY_007358	Likely anaphase-promoting complex subunit Cdc16. (1068 aa)
	PHSY_007041	Potential Endonuclease/Exonuclease/Phosphatase. (504 aa)
	PHSY_006835	Uncharacterized protein. (1755 aa)
	PHSY_006800	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1313 aa)
	PHSY_006577	Uncharacterized protein. (1278 aa)
	PHSY_006510	Uncharacterized protein. (957 aa)
	PHSY_006450	Likely protein kinase. (846 aa)
	PHSY_005121	Replication fork protection complex subunit. (1298 aa)
	PHSY_004925	SANT_DAMP1_like domain-containing protein. (618 aa)
	PHSY_004890	Uncharacterized protein. (317 aa)
	PHSY_004885	Potential SET3 histone deacetylase complex component Snt1p. (2432 aa)
	PHSY_004730	Uncharacterized protein. (430 aa)
	PHSY_004509	Histone deacetylase complex protein. (202 aa)
	PHSY_007477	Uncharacterized protein. (2113 aa)
	PHSY_007372	Uncharacterized protein. (202 aa)
	PHSY_007321	MAF1 protein. (545 aa)
	PHSY_007249	Phosphatase. (680 aa)
	PHSY_007247	Topoisomerase II. (933 aa)
	PHSY_007246	Uncharacterized protein. (817 aa)
	PHSY_007075	ER-associated protein catabolism-related protein. (736 aa)
	PHSY_006950	RNA binding repeat containing protein. (1026 aa)
	PHSY_006827	WD_REPEATS_REGION domain-containing protein. (323 aa)
	PHSY_006912	DNA repair protein rad5. (1632 aa)
	PHSY_006861	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1152 aa)
	PHSY_006710	Structural maintenance of chromosomes protein. (1223 aa)
	PHSY_006814	SAM domain-containing protein. (733 aa)
	PHSY_003468	Response to unfolded-protein protein. (174 aa)
	PHSY_006661	Chromo domain-containing protein. (455 aa)
	PHSY_006615	60S ribosomal protein L13/L16. (204 aa)
	PHSY_006276	SRP9-21 domain-containing protein. (141 aa)
	PHSY_006201	Potential mRNA deadenylase and CCR4-NOT complex subunit Pop2p. (300 aa)
	PHSY_006176	Serine/threonine-protein phosphatase. (346 aa)
	PAN3	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (810 aa)
	PHSY_006225	WD_REPEATS_REGION domain-containing protein. (378 aa)
	PHSY_006050	Chromo domain-containing protein. (398 aa)
	PHSY_005880	Uncharacterized protein. (423 aa)
	PHSY_002650	Uncharacterized protein. (665 aa)
	PHSY_005902	RNA polymerase II fourth largest subunit. (160 aa)
	PHSY_002443	Likely protein kinase. (624 aa)
	PHSY_002343	Uncharacterized protein. (425 aa)
	PHSY_005349	RNase_PH domain-containing protein. (316 aa)
	PHSY_005314	TPR_REGION domain-containing protein. (1198 aa)
	PHSY_005366	Potential jumonji-like transcriptional repressor of PHR1. (1455 aa)
	PHSY_005350	RNA binding repeat containing protein. (714 aa)
	PHSY_005213	Potential Arf GTPase-activating protein. (638 aa)
	PHSY_005140	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (186 aa)
	PHSY_004998	WD_REPEATS_REGION domain-containing protein. (849 aa)
	PHSY_004992	Potential mRNA deadenylase and CCR4-NOT complex subunit Not5p. (716 aa)
	PHSY_005117	Uncharacterized protein. (400 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (148 aa)
	PHSY_005009	Uncharacterized protein. (744 aa)
	PHSY_004919	Likely protein kinase. (1220 aa)
	PHSY_004973	Uncharacterized protein. (681 aa)
	PHSY_004807	Negative regulator of iron uptake genes. (1084 aa)
	PHSY_004913	Nudix hydrolase domain-containing protein. (880 aa)
	PHSY_004908	Transcription regulator. (640 aa)
	PHSY_004858	Ankyrin repeat protein. (748 aa)
	PHSY_004764	Uncharacterized protein. (2698 aa)
	PHSY_004818	Potential forkhead-like transcriptional regulator. (1776 aa)
	PHSY_001370	WD_REPEATS_REGION domain-containing protein. (813 aa)
	PHSY_004517	Uncharacterized protein. (141 aa)
	PHSY_004296	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (962 aa)
	PHSY_004378	Uncharacterized protein. (921 aa)
	PHSY_004057	Histone H2A; Belongs to the histone H2A family. (136 aa)
	PHSY_004051	Uncharacterized protein. (195 aa)
	PHSY_003867	Protein BSP2. (1085 aa)
	PHSY_003769	Scavenger mRNA decapping enzyme. (286 aa)
	PHSY_000494	Vacuolar protein-sorting-associated protein. (235 aa)
	PHSY_003621	Uncharacterized protein. (500 aa)
	PHSY_003544	Uncharacterized protein. (878 aa)
	PHSY_003524	Uncharacterized protein. (1084 aa)
	PHSY_003561	C2H2-type domain-containing protein. (352 aa)
	PHSY_003043	DUF1752 domain-containing protein. (1134 aa)
	PHSY_002972	Potential mRNA deadenylase and CCR4-NOT complex subunit Cdc39p. (2109 aa)
	PHSY_002947	Translation initiation factor. (434 aa)
	PHSY_003154	CTLH domain-containing protein. (227 aa)
	PHSY_002997	Uncharacterized protein. (1416 aa)
	PHSY_002877	Likely exosome component. (180 aa)
	PHSY_002951	G2/M phase checkpoint control protein. (421 aa)
	PHSY_003009	PHD-type domain-containing protein. (654 aa)
	PHSY_002989	RNase_PH domain-containing protein. (377 aa)
	PHSY_002742	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2410 aa)
	PHSY_002821	Predicted exosome subunit. (228 aa)
	PHSY_002838	Potential mRNA deadenylase. (661 aa)
	PHSY_002808	Nuclear transcription factor. (145 aa)
	PHSY_002609	5'-3' exoribonuclease. (1274 aa)
	PHSY_002475	Potential ubiquitin-protein ligase. (2047 aa)
	PHSY_002437	RNase_PH domain-containing protein. (297 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1428 aa)
	PHSY_002240	mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway. (152 aa)
	PHSY_002199	Probable translation elongation factor. (754 aa)
	PHSY_001900	Likely nuclear exosome component. (1009 aa)
	PHSY_001854	Uncharacterized protein. (733 aa)
	PHSY_001712	PHD domain-containing protein. (1099 aa)
	PHSY_001672	Ubiquitin fusion degradation protein. (426 aa)
	PHSY_001391	Histone H1. (206 aa)
	PHSY_001445	RNA-binding protein. (1158 aa)
	PHSY_001194	Plus3 domain-containing protein. (599 aa)
	PHSY_001051	HDAC_interact domain-containing protein. (1517 aa)
	PHSY_001019	LisH domain-containing protein. (482 aa)
	PHSY_001033	YTH domain-containing protein. (990 aa)
	PHSY_000938	NYN domain-containing protein. (846 aa)
	PHSY_000759	Likely exosome component. (406 aa)
	PHSY_000711	Uncharacterized protein. (249 aa)
	PHSY_000582	Ubiquitin. (433 aa)
	PHSY_000517	PINc domain-containing protein. (1451 aa)
	PHSY_000654	Rpd3 histone deacetylase complex. (733 aa)
	PHSY_000599	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (560 aa)
	PHSY_000460	Uncharacterized protein. (813 aa)
	PHSY_000538	Uncharacterized protein. (583 aa)
	PHSY_000367	Uncharacterized protein. (1710 aa)
	PHSY_000284	Uncharacterized protein. (184 aa)
	PHSY_000324	Uncharacterized protein. (527 aa)
	PHSY_000258	Uncharacterized protein. (302 aa)
	PHSY_000035	R3H domain-containing protein. (1179 aa)
	PHSY_000030	BRCT domain-containing protein. (1049 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	PHSY_001194	R9P828	R9NY75	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Plus3 domain-containing protein.	0.408
LSM1	PHSY_002838	R9P828	R9P1S8	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Potential mRNA deadenylase.	0.529
LSM1	PHSY_002951	R9P828	R9P265	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	G2/M phase checkpoint control protein.	0.650
LSM1	PHSY_002972	R9P828	R9P2H3	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Potential mRNA deadenylase and CCR4-NOT complex subunit Cdc39p.	0.452
LSM1	PHSY_004913	R9P828	R9P7I4	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Nudix hydrolase domain-containing protein.	0.920
LSM1	PHSY_005117	R9P828	R9P838	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.859
LSM1	PHSY_006835	R9P828	R9PM89	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.994
LSM1	PHSY_007247	R9P828	R9PE47	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Topoisomerase II.	0.996
PAN2	PAN3	R9P102	R9PBA2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...]	0.999
PAN2	PHSY_002437	R9P102	R9P152	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	RNase_PH domain-containing protein.	0.410
PAN2	PHSY_002821	R9P102	R9P1V7	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	Predicted exosome subunit.	0.410
PAN2	PHSY_002838	R9P102	R9P1S8	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	Potential mRNA deadenylase.	0.722
PAN2	PHSY_002972	R9P102	R9P2H3	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	Potential mRNA deadenylase and CCR4-NOT complex subunit Cdc39p.	0.410
PAN2	PHSY_003054	R9P102	R9P278	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	60S ribosomal protein.	0.449
PAN2	PHSY_006201	R9P102	R9PBJ0	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	Potential mRNA deadenylase and CCR4-NOT complex subunit Pop2p.	0.509
PAN2	PHSY_006615	R9P102	R9PC77	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	60S ribosomal protein L13/L16.	0.449
PAN2	PHSY_006835	R9P102	R9PM89	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	Uncharacterized protein.	0.426
PAN2	PHSY_007041	R9P102	R9PMV8	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	Potential Endonuclease/Exonuclease/Phosphatase.	0.516
PAN2	PHSY_007477	R9P102	R9PET3	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	Uncharacterized protein.	0.433
PAN3	PAN2	R9PBA2	R9P102	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...]	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...]	0.999