111 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_003650	Uncharacterized protein. (1017 aa)
	PHSY_003547	Uncharacterized protein. (356 aa)
	PHSY_003678	PKHD-type hydroxylase. (666 aa)
	PHSY_003347	CAP10 domain-containing protein. (527 aa)
	PHSY_003203	Uncharacterized protein. (1140 aa)
	PHSY_003148	Uncharacterized protein. (298 aa)
	PHSY_003003	Uncharacterized protein. (609 aa)
	PHSY_002938	Uncharacterized protein. (698 aa)
	PHSY_002824	CAP10 domain-containing protein. (452 aa)
	PHSY_002823	Uncharacterized protein. (652 aa)
	PHSY_002708	Uncharacterized protein. (657 aa)
	PHSY_002552	Uncharacterized protein. (1694 aa)
	PHSY_002490	Histidine kinase. (538 aa)
	PHSY_002434	Uncharacterized protein. (372 aa)
	PHSY_002396	Non-specific serine/threonine protein kinase. (839 aa)
	PHSY_002264	Chorismate mutase. (282 aa)
	PHSY_002109	Uncharacterized protein. (668 aa)
	PHSY_001893	Uncharacterized protein. (560 aa)
	PHSY_001889	Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (486 aa)
	PHSY_001820	Uncharacterized protein. (437 aa)
	PHSY_001726	Uncharacterized protein. (1627 aa)
	PHSY_004363	Guanyl-nucleotide exchange factor. (1897 aa)
	PHSY_003947	Vacuolar membrane-associated protein. (1845 aa)
	PHSY_003961	Uncharacterized protein. (213 aa)
	PHSY_000651	Uncharacterized protein. (754 aa)
	PHSY_001774	Uncharacterized protein. (563 aa)
	PHSY_000636	Lipase_3 domain-containing protein. (1760 aa)
	PHSY_000601	Uncharacterized protein. (258 aa)
	PHSY_000377	Uncharacterized protein. (1853 aa)
	PHSY_003809	RWD domain-containing protein. (299 aa)
	PHSY_003801	WD_REPEATS_REGION domain-containing protein. (805 aa)
	PHSY_003913	RHOMBOID-like protein. (602 aa)
	PHSY_000629	Cystathionine beta-lyase. (423 aa)
	PHSY_000502	Phosducin domain-containing protein. (359 aa)
	PHSY_004688	SMK-1 domain-containing protein. (1200 aa)
	PHSY_000918	Uncharacterized protein. (190 aa)
	PHSY_000953	TPR_REGION domain-containing protein. (479 aa)
	PHSY_001013	Protein kinase. (1375 aa)
	PHSY_001194	Plus3 domain-containing protein. (599 aa)
	PHSY_001296	Glycoside hydrolase. (401 aa)
	PHSY_001412	Uncharacterized protein. (280 aa)
	PHSY_003656	WD_REPEATS_REGION domain-containing protein. (1363 aa)
	PHSY_000454	RING-type domain-containing protein. (822 aa)
	PHSY_006176	Serine/threonine-protein phosphatase. (346 aa)
	PHSY_006297	DUF89 domain-containing protein. (500 aa)
	PHSY_006265	OTU-like cysteine protease. (614 aa)
	PHSY_006225	WD_REPEATS_REGION domain-containing protein. (378 aa)
	PHSY_006038	Uncharacterized protein. (279 aa)
	PHSY_005841	Glycoside hydrolase. (546 aa)
	PHSY_002630	Tyrosine-protein phosphatase. (1033 aa)
	PHSY_005858	Likely protein kinase. (812 aa)
	PHSY_005750	Potential phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family. (3154 aa)
	PHSY_005665	SEC7 domain-containing protein. (2138 aa)
	PHSY_005465	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (494 aa)
	PHSY_005405	Uncharacterized protein. (392 aa)
	PHSY_005491	Uncharacterized protein. (1629 aa)
	PHSY_005334	Stress responsive A/B barrel domain protein. (190 aa)
	PHSY_005314	TPR_REGION domain-containing protein. (1198 aa)
	PHSY_005301	Uncharacterized protein. (311 aa)
	PHSY_005183	GTP-binding protein. (368 aa)
	PHSY_005173	Uncharacterized protein. (1345 aa)
	PHSY_005290	Uncharacterized protein. (608 aa)
	PHSY_005135	Uncharacterized protein. (555 aa)
	PHSY_005184	Potential sterol binding protein; Belongs to the cytochrome b5 family. (115 aa)
	PHSY_005077	AvaB protein. (1389 aa)
	PHSY_005045	Uncharacterized protein. (947 aa)
	PHSY_004994	RNase III domain-containing protein. (482 aa)
	PHSY_005017	Uncharacterized protein. (892 aa)
	PHSY_004924	Ras-GAP domain-containing protein. (790 aa)
	PHSY_004878	Uncharacterized protein. (754 aa)
	PHSY_004831	RhoGAP group protein. (1172 aa)
	PHSY_004641	Uncharacterized protein. (597 aa)
	PHSY_001170	Glycosyltransferase. (779 aa)
	PHSY_004517	Uncharacterized protein. (141 aa)
	PHSY_001260	Glutamate synthase. (352 aa)
	PHSY_004513	Serine/threonine-protein phosphatase. (305 aa)
	PHSY_001295	Glycoside hydrolase. (605 aa)
	PHSY_004662	SEC7 domain-containing protein. (1845 aa)
	PHSY_004678	Uncharacterized protein. (2646 aa)
	PHSY_000068	Ptenb protein. (812 aa)
	PHSY_000324	Uncharacterized protein. (527 aa)
	PHSY_007031	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (643 aa)
	PHSY_006420	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (433 aa)
	PHSY_005618	FHA domain-containing protein. (850 aa)
	PHSY_005508	SEC7 domain-containing protein. (2033 aa)
	PHSY_005347	Uncharacterized protein. (585 aa)
	PHSY_004996	Expressed protein. (400 aa)
	PHSY_004935	Potential GTPase Activating protein. (2153 aa)
	PHSY_004730	Uncharacterized protein. (430 aa)
	PHSY_004554	Uncharacterized protein. (175 aa)
	PHSY_007390	Response regulatory domain-containing protein. (503 aa)
	PHSY_007299	Uncharacterized protein. (1632 aa)
	PHSY_007073	Proteasome activator. (268 aa)
	PHSY_003885	Uncharacterized protein. (795 aa)
	PHSY_007153	UBIQUITIN_CONJUGAT_2 domain-containing protein. (906 aa)
	PHSY_003860	OBG-type G domain-containing protein. (367 aa)
	PHSY_006898	Rab-GAP TBC domain-containing protein. (319 aa)
	PHSY_006999	Expressed protein. (470 aa)
	PHSY_006827	WD_REPEATS_REGION domain-containing protein. (323 aa)
	PHSY_003629	CAP10 domain-containing protein. (489 aa)
	PHSY_006890	SEC7 domain-containing protein. (1622 aa)
	PHSY_006899	Uncharacterized protein. (408 aa)
	PHSY_003579	Glycoside hydrolase. (1199 aa)
	PHSY_006864	BZIP domain-containing protein. (1184 aa)
	PHSY_006761	Uncharacterized protein. (555 aa)
	PHSY_006741	Glycoside hydrolase. (595 aa)
	PHSY_006821	Uncharacterized protein. (1102 aa)
	PHSY_006768	Uncharacterized protein. (679 aa)
	PHSY_003417	Uncharacterized protein. (1051 aa)
	PHSY_006574	Bromo domain-containing protein. (800 aa)
	PHSY_006683	Histidine kinase group protein. (1764 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHSY_000068	PHSY_002938	R9NVM2	R9P212	Ptenb protein.	Uncharacterized protein.	0.526
PHSY_000068	PHSY_004935	R9NVM2	R9PH02	Ptenb protein.	Potential GTPase Activating protein.	0.472
PHSY_000068	PHSY_005750	R9NVM2	R9P9V8	Ptenb protein.	Potential phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.	0.405
PHSY_000068	PHSY_005858	R9NVM2	R9PA73	Ptenb protein.	Likely protein kinase.	0.453
PHSY_000068	PHSY_006265	R9NVM2	R9PBB6	Ptenb protein.	OTU-like cysteine protease.	0.743
PHSY_000068	PHSY_007073	R9NVM2	R9PE01	Ptenb protein.	Proteasome activator.	0.572
PHSY_000324	PHSY_000651	R9NW45	R9P4Q1	Uncharacterized protein.	Uncharacterized protein.	0.652
PHSY_000324	PHSY_002938	R9NW45	R9P212	Uncharacterized protein.	Uncharacterized protein.	0.534
PHSY_000324	PHSY_004513	R9NW45	R9P6H1	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.408
PHSY_000324	PHSY_005301	R9NW45	R9P8P2	Uncharacterized protein.	Uncharacterized protein.	0.497
PHSY_000324	PHSY_005314	R9NW45	R9P8Y6	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.404
PHSY_000324	PHSY_005858	R9NW45	R9PA73	Uncharacterized protein.	Likely protein kinase.	0.649
PHSY_000324	PHSY_006176	R9NW45	R9PBG7	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.427
PHSY_000377	PHSY_001889	R9NWG5	R9NZN0	Uncharacterized protein.	Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.	0.446
PHSY_000377	PHSY_005314	R9NWG5	R9P8Y6	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.544
PHSY_000377	PHSY_006176	R9NWG5	R9PBG7	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.525
PHSY_000377	PHSY_006225	R9NWG5	R9PB79	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.570
PHSY_000502	PHSY_000651	R9NWT0	R9P4Q1	Phosducin domain-containing protein.	Uncharacterized protein.	0.621
PHSY_000651	PHSY_000324	R9P4Q1	R9NW45	Uncharacterized protein.	Uncharacterized protein.	0.652
PHSY_000651	PHSY_000502	R9P4Q1	R9NWT0	Uncharacterized protein.	Phosducin domain-containing protein.	0.621