12 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_007003	TPR_REGION domain-containing protein. (775 aa)
	PHSY_000072	DNA helicase I. (1145 aa)
	PHSY_000590	DUF1767 domain-containing protein. (468 aa)
	PHSY_000547	ERCC4 domain-containing protein. (851 aa)
	PHSY_001450	Predicted ATPase. (1289 aa)
	PHSY_001366	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1523 aa)
	PHSY_002351	Nuclease. (601 aa)
	PHSY_005471	Likely protein kinase. (958 aa)
	PHSY_002418	PCI domain-containing protein. (391 aa)
	PHSY_005858	Likely protein kinase. (812 aa)
	PHSY_002775	Single-stranded DNA endonuclease. (992 aa)
	PHSY_007358	Likely anaphase-promoting complex subunit Cdc16. (1068 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHSY_000072	PHSY_000590	R9NVK7	R9NWU8	DNA helicase I.	DUF1767 domain-containing protein.	0.514
PHSY_000072	PHSY_001366	R9NVK7	R9NYN7	DNA helicase I.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.468
PHSY_000072	PHSY_002351	R9NVK7	R9P0P0	DNA helicase I.	Nuclease.	0.711
PHSY_000072	PHSY_002775	R9NVK7	R9PAT2	DNA helicase I.	Single-stranded DNA endonuclease.	0.481
PHSY_000547	PHSY_002351	R9NWW3	R9P0P0	ERCC4 domain-containing protein.	Nuclease.	0.851
PHSY_000547	PHSY_002775	R9NWW3	R9PAT2	ERCC4 domain-containing protein.	Single-stranded DNA endonuclease.	0.562
PHSY_000590	PHSY_000072	R9NWU8	R9NVK7	DUF1767 domain-containing protein.	DNA helicase I.	0.514
PHSY_000590	PHSY_001450	R9NWU8	R9NYM1	DUF1767 domain-containing protein.	Predicted ATPase.	0.536
PHSY_000590	PHSY_002351	R9NWU8	R9P0P0	DUF1767 domain-containing protein.	Nuclease.	0.944
PHSY_000590	PHSY_002775	R9NWU8	R9PAT2	DUF1767 domain-containing protein.	Single-stranded DNA endonuclease.	0.948
PHSY_001366	PHSY_000072	R9NYN7	R9NVK7	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	DNA helicase I.	0.468
PHSY_001366	PHSY_001450	R9NYN7	R9NYM1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Predicted ATPase.	0.735
PHSY_001366	PHSY_002351	R9NYN7	R9P0P0	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Nuclease.	0.462
PHSY_001366	PHSY_005471	R9NYN7	R9P928	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Likely protein kinase.	0.654
PHSY_001366	PHSY_005858	R9NYN7	R9PA73	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Likely protein kinase.	0.550
PHSY_001366	PHSY_007003	R9NYN7	R9PDU6	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	TPR_REGION domain-containing protein.	0.453
PHSY_001450	PHSY_000590	R9NYM1	R9NWU8	Predicted ATPase.	DUF1767 domain-containing protein.	0.536
PHSY_001450	PHSY_001366	R9NYM1	R9NYN7	Predicted ATPase.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.735
PHSY_001450	PHSY_002351	R9NYM1	R9P0P0	Predicted ATPase.	Nuclease.	0.649
PHSY_001450	PHSY_002775	R9NYM1	R9PAT2	Predicted ATPase.	Single-stranded DNA endonuclease.	0.467