125 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_002437	RNase_PH domain-containing protein. (297 aa)
	PHSY_002252	Bms1-type G domain-containing protein. (1156 aa)
	PHSY_002259	Protein kinase. (738 aa)
	PHSY_002167	Uncharacterized protein. (515 aa)
	PHSY_002216	Uncharacterized protein. (926 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (917 aa)
	PHSY_001900	Likely nuclear exosome component. (1009 aa)
	PHSY_001665	Likely small subunit rRNA processing protein. (363 aa)
	PHSY_001608	Ribosomal protein. (110 aa)
	PHSY_001662	Nop domain-containing protein. (583 aa)
	PHSY_001612	60S ribosomal protein. (210 aa)
	PHSY_001374	KH domain-containing protein. (311 aa)
	PHSY_001286	Uncharacterized protein. (419 aa)
	PHSY_001353	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (242 aa)
	PHSY_001017	Uncharacterized protein. (526 aa)
	PHSY_000914	Uncharacterized protein. (1071 aa)
	PHSY_000978	Uncharacterized protein. (113 aa)
	PHSY_000801	U3 snoRNP protein. (958 aa)
	PHSY_000770	Uncharacterized protein. (1804 aa)
	PHSY_000759	Likely exosome component. (406 aa)
	PHSY_000567	Uncharacterized protein; Belongs to the DEAD box helicase family. (538 aa)
	PHSY_000518	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	PHSY_000385	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (195 aa)
	PHSY_000405	Likely mitochondrial ribosomal protein. (455 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (342 aa)
	PHSY_000329	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (101 aa)
	PHSY_000021	Fibrillarin-like rRNA methylase. (321 aa)
	PHSY_000001	Membrane protein. (871 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (677 aa)
	PHSY_007046	Cytoplasm protein. (738 aa)
	PHSY_007011	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (107 aa)
	PHSY_006941	Uncharacterized protein. (912 aa)
	PHSY_006667	Protein ENP1. (531 aa)
	PHSY_006557	Uncharacterized protein. (359 aa)
	PHSY_006319	CBF domain-containing protein. (844 aa)
	PHSY_006314	Uncharacterized protein. (1313 aa)
	PHSY_006064	Uncharacterized protein. (1221 aa)
	PHSY_005908	RIO domain-containing protein. (646 aa)
	PHSY_005862	Likely cytosolic ribosomal protein S20. (122 aa)
	PHSY_005216	Small nucleolar ribonucleoprotein protein. (981 aa)
	PHSY_004955	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	PHSY_004890	Uncharacterized protein. (317 aa)
	PHSY_004800	SSU ribosomal protein S13P; Belongs to the universal ribosomal protein uS13 family. (154 aa)
	PHSY_004710	Uncharacterized protein. (698 aa)
	PHSY_004524	Uncharacterized protein. (616 aa)
	PHSY_007475	Uncharacterized protein. (1109 aa)
	PHSY_007440	WD_REPEATS_REGION domain-containing protein. (573 aa)
	PHSY_007404	Uncharacterized protein. (1089 aa)
	PHSY_007394	Ipi1_N domain-containing protein. (747 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (924 aa)
	PHSY_003920	40S ribosomal protein S27. (311 aa)
	PHSY_003875	WD_REPEATS_REGION domain-containing protein. (921 aa)
	PHSY_007111	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (703 aa)
	PHSY_007088	Nucleolar protein. (337 aa)
	PHSY_007047	Likely exosome component Csl4p. (257 aa)
	PHSY_007034	U3 snoRNP-associated protein Rrp5. (1561 aa)
	PHSY_007019	SAP domain-containing protein. (420 aa)
	PHSY_006960	Potential essential protein. (204 aa)
	PHSY_006927	Likely protein kinase; Belongs to the protein kinase superfamily. (378 aa)
	PHSY_006919	Homeobox domain-containing protein. (695 aa)
	PHSY_006797	Uncharacterized protein. (1348 aa)
	PHSY_006781	U3 small nucleolar RNA-associated protein 10. (2250 aa)
	PHSY_006559	40S ribosomal protein S22. (96 aa)
	PHSY_006591	Likely exosome component Ski6p. (307 aa)
	PHSY_006561	40s ribosomal protein S17. (168 aa)
	PHSY_006558	SSU ribosomal protein S8P; Belongs to the universal ribosomal protein uS8 family. (124 aa)
	PHSY_003146	RIX1 domain-containing protein. (1018 aa)
	PHSY_003116	Ulp1 protease. (884 aa)
	PHSY_006389	Uncharacterized protein. (651 aa)
	PHSY_006396	ULP_PROTEASE domain-containing protein. (779 aa)
	PHSY_006305	S4 RNA-binding domain-containing protein. (189 aa)
	PHSY_006292	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	PHSY_005993	rRNA processing-related protein. (558 aa)
	PHSY_002685	Nop domain-containing protein. (519 aa)
	PHSY_005932	Uncharacterized protein; Belongs to the DEAD box helicase family. (612 aa)
	PHSY_005660	Potential U3 snoRNP protein Utp20p. (3057 aa)
	PHSY_002348	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (200 aa)
	PHSY_005490	Uncharacterized protein. (818 aa)
	PHSY_005349	RNase_PH domain-containing protein. (316 aa)
	PHSY_005304	rRNA processing-related protein. (465 aa)
	PHSY_005199	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (167 aa)
	PHSY_005127	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (504 aa)
	PHSY_005055	40S ribosomal protein S29-A. (148 aa)
	PHSY_004762	Predicted midasin. (805 aa)
	PHSY_004686	Uncharacterized protein. (1066 aa)
	PHSY_004511	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (159 aa)
	PHSY_004553	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (186 aa)
	PHSY_004518	Potential small subunit rRNA processome component. (987 aa)
	PHSY_004510	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (120 aa)
	PHSY_004386	KH domain-containing protein. (455 aa)
	PHSY_004448	GTPase, predicted. (658 aa)
	PHSY_004428	RNA exonuclease 4. (373 aa)
	PHSY_004336	Predicted rRNA processing protein. (471 aa)
	PHSY_004492	Uncharacterized protein; Belongs to the DEAD box helicase family. (530 aa)
	PHSY_001110	WD_REPEATS_REGION domain-containing protein. (905 aa)
	PHSY_004335	WD_REPEATS_REGION domain-containing protein. (642 aa)
	PHSY_001045	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (246 aa)
	PHSY_004077	Uncharacterized protein. (1102 aa)
	PHSY_000829	RNA 3'-terminal phosphate cyclase. (417 aa)
	PHSY_003937	Brix domain-containing protein. (288 aa)
	PHSY_004009	Uncharacterized protein. (296 aa)
	PHSY_000773	40S ribosomal protein S19. (214 aa)
	PHSY_003969	WD_REPEATS_REGION domain-containing protein. (503 aa)
	PHSY_003872	Uncharacterized protein. (606 aa)
	PHSY_000682	40S ribosomal protein S10. (157 aa)
	PHSY_003525	Uncharacterized protein. (714 aa)
	PHSY_003445	60S ribosomal protein L28. (388 aa)
	PHSY_003467	Bms1-type G domain-containing protein. (955 aa)
	PHSY_003514	40S ribosomal protein S26. (256 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (276 aa)
	PHSY_003303	WD_REPEATS_REGION domain-containing protein. (1111 aa)
	PHSY_003335	40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (291 aa)
	PHSY_003305	GTPase, predicted. (738 aa)
	PHSY_003250	Uncharacterized protein. (1044 aa)
	PHSY_003165	WD_REPEATS_REGION domain-containing protein. (590 aa)
	PHSY_003018	40S ribosomal protein S16. (210 aa)
	PHSY_003047	ULP_PROTEASE domain-containing protein. (1403 aa)
	PHSY_002877	Likely exosome component. (180 aa)
	PHSY_002989	RNase_PH domain-containing protein. (377 aa)
	PHSY_002846	Uncharacterized protein. (393 aa)
	PHSY_002821	Predicted exosome subunit. (228 aa)
	PHSY_002669	60S ribosomal protein. (282 aa)
	PHSY_002609	5'-3' exoribonuclease. (1274 aa)
	PHSY_002638	Nucleolar essential protein. (365 aa)
	PHSY_002215	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	R9P087	R9PMW6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	PHSY_000021	R9P087	R9NVJ0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Fibrillarin-like rRNA methylase.	0.930
ERB1	PHSY_000567	R9P087	R9NWU9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.926
ERB1	PHSY_000770	R9P087	R9NXD0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.599
ERB1	PHSY_000801	R9P087	R9NXF5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 snoRNP protein.	0.754
ERB1	PHSY_000829	R9P087	R9P587	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA 3'-terminal phosphate cyclase.	0.632
ERB1	PHSY_000914	R9P087	R9NXL0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.896
ERB1	PHSY_000978	R9P087	R9NXJ0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.901
ERB1	PHSY_001017	R9P087	R9NY04	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.999
ERB1	PHSY_001110	R9P087	R9P607	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.898
ERB1	PHSY_001286	R9P087	R9NYH0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.547
ERB1	PHSY_001374	R9P087	R9NYM4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	KH domain-containing protein.	0.588
ERB1	PHSY_001612	R9P087	R9NYX4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein.	0.707
ERB1	PHSY_001662	R9P087	R9NZ23	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nop domain-containing protein.	0.975
ERB1	PHSY_001665	R9P087	R9NZB3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Likely small subunit rRNA processing protein.	0.479
ERB1	PHSY_002215	R9P087	R9P0Q1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.974
ERB1	PHSY_002216	R9P087	R9P0C2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.892
ERB1	PHSY_002252	R9P087	R9P0N6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Bms1-type G domain-containing protein.	0.875
ERB1	PHSY_002609	R9P087	R9P1H8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	5'-3' exoribonuclease.	0.540
ERB1	PHSY_002638	R9P087	R9P199	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar essential protein.	0.445