54 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_002942	CULLIN_2 domain-containing protein; Belongs to the cullin family. (823 aa)
	PHSY_000072	DNA helicase I. (1145 aa)
	PHSY_000468	Uncharacterized protein. (1516 aa)
	PHSY_000582	Ubiquitin. (433 aa)
	PHSY_000766	DNA ligase. (1078 aa)
	PHSY_000926	DNA polymerase delta subunit 4. (172 aa)
	PHSY_000961	Pre-mRNA-splicing factor. (1512 aa)
	PHSY_001021	DNA repair protein. (359 aa)
	PHSY_001079	Potential regulator of cell polarity. (1251 aa)
	PHSY_001201	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (440 aa)
	PHSY_001443	Replication factor C subunit 1. (958 aa)
	PHSY_001681	Single-stranded DNA binding protein. (136 aa)
	PHSY_002080	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (168 aa)
	PHSY_002359	AAA domain-containing protein. (341 aa)
	PHSY_002668	Excision repair protein. (316 aa)
	PHSY_002657	Telomere length regulation protein. (1172 aa)
	PHSY_002766	Uncharacterized protein. (1484 aa)
	PHSY_000064	Possible DNA polymerase delta subunit. (565 aa)
	PHSY_003357	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (793 aa)
	PHSY_003531	Uncharacterized protein. (1276 aa)
	PHSY_003566	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (371 aa)
	PHSY_003480	Potential acid sphingomyelin phosphodiesterase. (513 aa)
	PHSY_003744	DNA_ligase_OB_2 domain-containing protein. (851 aa)
	PHSY_000555	CBFD_NFYB_HMF domain-containing protein. (226 aa)
	PHSY_003856	Potential DNA repair helicase. (1451 aa)
	PHSY_004113	DNA polymerase. (1057 aa)
	PHSY_003972	Uncharacterized protein. (520 aa)
	PHSY_000990	Telomere-associated helicase. (620 aa)
	PHSY_004383	AAA domain-containing protein. (384 aa)
	PHSY_004430	Chromatin-associated protein. (454 aa)
	PHSY_004645	Uncharacterized protein. (715 aa)
	PHSY_004636	Uncharacterized protein. (546 aa)
	PHSY_004857	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2300 aa)
	PHSY_005177	Uncharacterized protein. (826 aa)
	PHSY_005341	Uncharacterized protein. (614 aa)
	PHSY_005442	Vezatin domain-containing protein. (1366 aa)
	PHSY_005554	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (507 aa)
	PHSY_005420	UDP-galactopyranose mutase. (503 aa)
	PHSY_005772	Single-stranded DNA binding protein 12k chain. (142 aa)
	PHSY_005788	DNA repair helicase. (849 aa)
	PHSY_002518	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (1237 aa)
	PHSY_002775	Single-stranded DNA endonuclease. (992 aa)
	PHSY_006618	Uncharacterized protein. (422 aa)
	PHSY_006621	AAA domain-containing protein. (353 aa)
	PHSY_006656	Potential histone-like transcription factor. (219 aa)
	PHSY_006522	DNA ligase. (847 aa)
	PHSY_003351	CYCLIN domain-containing protein; Belongs to the cyclin family. (467 aa)
	PHSY_003478	Uncharacterized protein. (296 aa)
	PHSY_007023	RING-type domain-containing protein. (361 aa)
	PHSY_007372	Uncharacterized protein. (202 aa)
	PHSY_007369	Uncharacterized protein. (948 aa)
	PHSY_007295	Chromatin-associated protein. (292 aa)
	PHSY_007031	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (643 aa)
	PHSY_007092	AAA domain-containing protein. (343 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHSY_000064	PHSY_000468	R9P330	R9NWK1	Possible DNA polymerase delta subunit.	Uncharacterized protein.	0.415
PHSY_000064	PHSY_000990	R9P330	R9P5Q8	Possible DNA polymerase delta subunit.	Telomere-associated helicase.	0.704
PHSY_000064	PHSY_001201	R9P330	R9NYA5	Possible DNA polymerase delta subunit.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.904
PHSY_000064	PHSY_001443	R9P330	R9NYV2	Possible DNA polymerase delta subunit.	Replication factor C subunit 1.	0.569
PHSY_000064	PHSY_001681	R9P330	R9NZH1	Possible DNA polymerase delta subunit.	Single-stranded DNA binding protein.	0.402
PHSY_000064	PHSY_002359	R9P330	R9P0T7	Possible DNA polymerase delta subunit.	AAA domain-containing protein.	0.567
PHSY_000064	PHSY_002657	R9P330	R9P1Q3	Possible DNA polymerase delta subunit.	Telomere length regulation protein.	0.647
PHSY_000064	PHSY_003357	R9P330	R9P362	Possible DNA polymerase delta subunit.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.566
PHSY_000064	PHSY_003480	R9P330	R9P3U1	Possible DNA polymerase delta subunit.	Potential acid sphingomyelin phosphodiesterase.	0.992
PHSY_000064	PHSY_003856	R9P330	R9P4J7	Possible DNA polymerase delta subunit.	Potential DNA repair helicase.	0.684
PHSY_000064	PHSY_004113	R9P330	R9P514	Possible DNA polymerase delta subunit.	DNA polymerase.	0.987
PHSY_000064	PHSY_004383	R9P330	R9P640	Possible DNA polymerase delta subunit.	AAA domain-containing protein.	0.550
PHSY_000064	PHSY_004857	R9P330	R9P7N8	Possible DNA polymerase delta subunit.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.820
PHSY_000064	PHSY_005177	R9P330	R9P894	Possible DNA polymerase delta subunit.	Uncharacterized protein.	0.562
PHSY_000064	PHSY_005442	R9P330	R9P946	Possible DNA polymerase delta subunit.	Vezatin domain-containing protein.	0.904
PHSY_000064	PHSY_006621	R9P330	R9PCE2	Possible DNA polymerase delta subunit.	AAA domain-containing protein.	0.566
PHSY_000064	PHSY_006656	R9P330	R9PCH2	Possible DNA polymerase delta subunit.	Potential histone-like transcription factor.	0.518
PHSY_000064	PHSY_007092	R9P330	R9PMZ7	Possible DNA polymerase delta subunit.	AAA domain-containing protein.	0.568
PHSY_000072	PHSY_000468	R9NVK7	R9NWK1	DNA helicase I.	Uncharacterized protein.	0.416
PHSY_000072	PHSY_001201	R9NVK7	R9NYA5	DNA helicase I.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.650