38 items (Pseudozyma hubeiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHSY_003478	Uncharacterized protein. (296 aa)
	PHSY_007372	Uncharacterized protein. (202 aa)
	PHSY_004770	DNA repair protein RAD50. (1309 aa)
	PHSY_005418	RAD57 protein. (756 aa)
	PHSY_005883	Mre11_DNA_bind domain-containing protein. (878 aa)
	PHSY_000030	BRCT domain-containing protein. (1049 aa)
	PHSY_000362	Uncharacterized protein. (116 aa)
	PHSY_000547	ERCC4 domain-containing protein. (851 aa)
	PIF1	ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (719 aa)
	PHSY_000926	DNA polymerase delta subunit 4. (172 aa)
	PHSY_001006	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (992 aa)
	PHSY_001079	Potential regulator of cell polarity. (1251 aa)
	PHSY_001576	SAE2 domain-containing protein. (477 aa)
	PHSY_001681	Single-stranded DNA binding protein. (136 aa)
	PHSY_002080	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (168 aa)
	PHSY_002284	Uncharacterized protein. (119 aa)
	PHSY_002351	Nuclease. (601 aa)
	PHSY_002763	Uncharacterized protein. (1098 aa)
	PHSY_003187	Uncharacterized protein. (1180 aa)
	PHSY_000064	Possible DNA polymerase delta subunit. (565 aa)
	PHSY_003357	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (793 aa)
	PHSY_003480	Potential acid sphingomyelin phosphodiesterase. (513 aa)
	PHSY_000677	Uncharacterized protein. (868 aa)
	PHSY_004113	DNA polymerase. (1057 aa)
	PHSY_003972	Uncharacterized protein. (520 aa)
	PHSY_004636	Uncharacterized protein. (546 aa)
	PHSY_005028	Uncharacterized protein. (1293 aa)
	PHSY_005177	Uncharacterized protein. (826 aa)
	PHSY_005192	PITH domain-containing protein. (226 aa)
	PHSY_005158	HD domain-containing protein. (294 aa)
	PHSY_005208	Smr domain-containing protein. (306 aa)
	PHSY_005420	UDP-galactopyranose mutase. (503 aa)
	PHSY_005750	Potential phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family. (3154 aa)
	PHSY_005772	Single-stranded DNA binding protein 12k chain. (142 aa)
	PHSY_005932	Uncharacterized protein; Belongs to the DEAD box helicase family. (612 aa)
	PHSY_006302	Uncharacterized protein. (846 aa)
	PHSY_003442	Uncharacterized protein. (1055 aa)
	PHSY_006654	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (339 aa)

Your Current Organism:

Pseudozyma hubeiensis

NCBI taxonomy Id: 1305764
Other names: P. hubeiensis SY62, Pseudozyma hubeiensis SY62

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHSY_000030	PHSY_001006	R9NVQ0	R9NXV4	BRCT domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.694
PHSY_000030	PHSY_001576	R9NVQ0	R9NZ90	BRCT domain-containing protein.	SAE2 domain-containing protein.	0.582
PHSY_000030	PHSY_001681	R9NVQ0	R9NZH1	BRCT domain-containing protein.	Single-stranded DNA binding protein.	0.525
PHSY_000030	PHSY_002284	R9NVQ0	R9P0N0	BRCT domain-containing protein.	Uncharacterized protein.	0.687
PHSY_000030	PHSY_002351	R9NVQ0	R9P0P0	BRCT domain-containing protein.	Nuclease.	0.718
PHSY_000030	PHSY_002763	R9NVQ0	R9P1L1	BRCT domain-containing protein.	Uncharacterized protein.	0.939
PHSY_000030	PHSY_003187	R9NVQ0	R9P2Q1	BRCT domain-containing protein.	Uncharacterized protein.	0.874
PHSY_000030	PHSY_003357	R9NVQ0	R9P362	BRCT domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.640
PHSY_000030	PHSY_003972	R9NVQ0	R9P5A0	BRCT domain-containing protein.	Uncharacterized protein.	0.525
PHSY_000030	PHSY_004113	R9NVQ0	R9P514	BRCT domain-containing protein.	DNA polymerase.	0.589
PHSY_000030	PHSY_004770	R9NVQ0	R9PGF2	BRCT domain-containing protein.	DNA repair protein RAD50.	0.855
PHSY_000030	PHSY_005028	R9NVQ0	R9P872	BRCT domain-containing protein.	Uncharacterized protein.	0.678
PHSY_000030	PHSY_005177	R9NVQ0	R9P894	BRCT domain-containing protein.	Uncharacterized protein.	0.640
PHSY_000030	PHSY_005418	R9NVQ0	R9PID2	BRCT domain-containing protein.	RAD57 protein.	0.768
PHSY_000030	PHSY_005750	R9NVQ0	R9P9V8	BRCT domain-containing protein.	Potential phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.	0.914
PHSY_000030	PHSY_005883	R9NVQ0	R9PJL5	BRCT domain-containing protein.	Mre11_DNA_bind domain-containing protein.	0.925
PHSY_000030	PHSY_006302	R9NVQ0	R9PBC2	BRCT domain-containing protein.	Uncharacterized protein.	0.792
PHSY_000030	PHSY_006654	R9NVQ0	R9PCT6	BRCT domain-containing protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.862
PHSY_000064	PHSY_000677	R9P330	R9P4S5	Possible DNA polymerase delta subunit.	Uncharacterized protein.	0.414
PHSY_000064	PHSY_001006	R9P330	R9NXV4	Possible DNA polymerase delta subunit.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.538