STRINGSTRING
APA00306.1 APA00306.1 APA01019.1 APA01019.1 APA00261.1 APA00261.1 APA00115.1 APA00115.1 APA00985.1 APA00985.1 AOZ99811.1 AOZ99811.1 AOZ99793.1 AOZ99793.1 APA00958.1 APA00958.1 AOZ99753.1 AOZ99753.1 AOZ99705.1 AOZ99705.1 AOZ99701.1 AOZ99701.1 APA00943.1 APA00943.1 APA00910.1 APA00910.1 AOZ99227.1 AOZ99227.1 APA00883.1 APA00883.1 AOZ98840.1 AOZ98840.1 AOZ98788.1 AOZ98788.1 AOZ98774.1 AOZ98774.1 APA00864.1 APA00864.1 AOZ98596.1 AOZ98596.1 AOZ98406.1 AOZ98406.1 AOZ97992.1 AOZ97992.1 AOZ97961.1 AOZ97961.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APA00306.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1063 aa)
APA01019.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1073 aa)
APA00261.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1029 aa)
APA00115.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1003 aa)
APA00985.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1071 aa)
AOZ99811.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1059 aa)
AOZ99793.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1087 aa)
APA00958.1SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1017 aa)
AOZ99753.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1004 aa)
AOZ99705.1SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1015 aa)
AOZ99701.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1050 aa)
APA00943.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1076 aa)
APA00910.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (990 aa)
AOZ99227.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1117 aa)
APA00883.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1010 aa)
AOZ98840.1SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1034 aa)
AOZ98788.1SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1024 aa)
AOZ98774.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1091 aa)
APA00864.1SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1165 aa)
AOZ98596.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1062 aa)
AOZ98406.1SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1015 aa)
AOZ97992.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1099 aa)
AOZ97961.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1030 aa)
Your Current Organism:
Flavobacterium commune
NCBI taxonomy Id: 1306519
Other names: F. commune, Flavobacterium commune Ekwe and Kim 2018, Flavobacterium communis, Flavobacterium sp. PK15, JCM 32115, KCTC 52562, strain PK15
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