STRINGSTRING
AHC16279.1 AHC16279.1 AHC13717.1 AHC13717.1 AHC13718.1 AHC13718.1 AHC13837.1 AHC13837.1 rnfB rnfB rnfC rnfC AHC13978.1 AHC13978.1 AHC14240.1 AHC14240.1 AHC15660.1 AHC15660.1 AHC15661.1 AHC15661.1 AHC15783.1 AHC15783.1 AHC16224.1 AHC16224.1 AHC16460.1 AHC16460.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AHC16279.1Pyruvate-flavodoxin oxidoreductase. (1193 aa)
AHC13717.1NAD-reducing hydrogenase subunit HoxF. (594 aa)
AHC13718.1Periplasmic [Fe] hydrogenase large subunit. (580 aa)
AHC13837.1Ketoisovalerate oxidoreductase subunit VorC. (83 aa)
rnfBElectron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (287 aa)
rnfCElectron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (445 aa)
AHC13978.1Periplasmic [Fe] hydrogenase. (463 aa)
AHC14240.1Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (455 aa)
AHC15660.1Cobyrinic acid ac-diamide synthase. (285 aa)
AHC15661.1MinD superfamily P-loop ATPase. (293 aa)
AHC15783.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (56 aa)
AHC16224.1Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (241 aa)
AHC16460.1Ferredoxin. (262 aa)
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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