STRINGSTRING
srtB srtB srtA srtA SrtT SrtT AKZ50287.1 AKZ50287.1 AKZ50288.1 AKZ50288.1 srtF srtF SrtE SrtE SrtG SrtG AKZ50292.1 AKZ50292.1 AKZ51360.1 AKZ51360.1 AKZ50293.1 AKZ50293.1 AKZ50294.1 AKZ50294.1 AKZ50295.1 AKZ50295.1 AKZ50296.1 AKZ50296.1 srtA_1 srtA_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
srtBSortase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
srtALantibiotic streptin; Lanthionine-containing peptide antibiotic (lantibiotic) active on certain Gram-positive bacteria. The bactericidal activity of lantibiotics is based on depolarization of energized bacterial cytoplasmic membranes, initiated by the formation of aqueous transmembrane pores. (46 aa)
SrtTLantibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
AKZ50287.1Lanthionine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
AKZ50288.1Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (988 aa)
srtFLantibiotic ABC transporter ATP-binding protein; Implicated in the export process of the lantibiotic SrtA. (229 aa)
SrtELantibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
SrtGLantibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
AKZ50292.1Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
AKZ51360.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
AKZ50293.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (43 aa)
AKZ50294.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
AKZ50295.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
AKZ50296.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
srtA_1Sortase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
Your Current Organism:
Streptococcus pyogenes
NCBI taxonomy Id: 1314
Other names: ATCC 12344, CCUG 12701, CCUG 4207, CIP 56.41, DSM 20565, JCM 5674, LMG 14700, LMG:14700, Micrococcus scarlatinae, NCAIM B.01705, NCTC 8198, S. pyogenes, Streptococcus erysipelatos, Streptococcus hemolyticus, Streptococcus scarlatinae
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