Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AtpH | atpA | SD89_02955 | SD89_02960 | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| AtpH | atpB | SD89_02955 | SD89_02945 | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AtpH | atpC | SD89_02955 | SD89_02975 | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| AtpH | atpD-2 | SD89_02955 | SD89_02970 | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| AtpH | atpE | SD89_02955 | SD89_02940 | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP F0F1 synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| AtpH | atpF | SD89_02955 | SD89_02950 | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AtpH | atpG | SD89_02955 | SD89_02965 | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| NtpA | NtpE | SD89_00875 | SD89_00860 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| NtpA | atpA | SD89_00875 | SD89_02960 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.580 |
| NtpA | atpC | SD89_00875 | SD89_02975 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.443 |
| NtpA | atpD | SD89_00875 | SD89_00885 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| NtpA | atpD-2 | SD89_00875 | SD89_02970 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.507 |
| NtpA | atpE | SD89_00875 | SD89_02940 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP F0F1 synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.994 |
| NtpA | atpG | SD89_00875 | SD89_02965 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.510 |
| NtpA | ntpB | SD89_00875 | SD89_00880 | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.999 |
| NtpE | NtpA | SD89_00860 | SD89_00875 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| NtpE | atpD | SD89_00860 | SD89_00885 | Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| NtpE | atpE | SD89_00860 | SD89_02940 | Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP F0F1 synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.980 |
| NtpE | ntpB | SD89_00860 | SD89_00880 | Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.999 |
| atpA | AtpH | SD89_02960 | SD89_02955 | ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0F1 subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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