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| | xerS | Site-specific tyrosine recombinase XerS; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. (356 aa) |
| | AKZ50423.1 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa) |
| | truB | tRNA pseudouridine synthase B; Catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa) |
| | hsdS2 | Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa) |
| | pcrA | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. (772 aa) |
| | dnaE | DNA polymerase III DnaE; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity); Belongs to the DNA polymerase type-C family. DnaE subfamily. (1036 aa) |
| | AKZ50474.1 | Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1307 aa) |
| | AKZ51364.1 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa) |
| | AKZ50488.1 | HNH nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa) |
| | AKZ50493.1 | Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa) |
| | AKZ51365.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa) |
| | AKZ50496.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa) |
| | AKZ50497.1 | Bacteriophage resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa) |
| | AKZ50516.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (362 aa) |
| | uvrB | The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa) |
| | AKZ50547.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa) |
| | AKZ51367.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa) |
| | AKZ50551.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa) |
| | RsuA | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa) |
| | AKZ50557.1 | Serine recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa) |
| | AKZ50558.1 | Sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa) |
| | AKZ51369.1 | Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa) |
| | AKZ50567.1 | Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa) |
| | AKZ50571.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | AKZ50577.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (451 aa) |
| | dnaN | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa) |
| | mfd | Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (1167 aa) |
| | tilS | tRNA(Ile)-lysidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa) |
| | recO | DNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination. (251 aa) |
| | ruvB | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (332 aa) |
| | RpoA | DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa) |
| | TyrS | tyrosine--tRNA ligase; Catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (1188 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1213 aa) |
| | AKZ49667.1 | Adenine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa) |
| | AKZ49674.1 | tRNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (208 aa) |
| | ssb_3 | Single-stranded DNA-binding protein; Binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa) |
| | dusB | TIM barrel oxidoreductase NifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (325 aa) |
| | nusG | Antitermination protein NusG; Participates in transcription elongation, termination and antitermination. (179 aa) |
| | LeuS | leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (833 aa) |
| | AKZ49721.1 | Xylulose 5-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa) |
| | polA | DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (880 aa) |
| | AKZ51344.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (59 aa) |
| | AKZ49733.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa) |
| | AKZ49734.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa) |
| | AKZ49737.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa) |
| | AKZ49738.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa) |
| | tgt | Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa) |
| | AKZ49742.1 | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa) |
| | AKZ49743.1 | Deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa) |
| | AKZ49748.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa) |
| | AKZ49756.1 | DNA integration/recombination/inversion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa) |
| | radA | DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa) |
| | GltX | glutamyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa) |
| | rnpA | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (119 aa) |
| | TatD | Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa) |
| | rnmV | DNA primase; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (189 aa) |
| | rsmA | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa) |
| | AKZ49781.1 | Recombinase RmuC; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa) |
| | Cbf | 3'-5' exonuclease; Catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa) |
| | PrgA | Surface exclusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (873 aa) |
| | AKZ49808.1 | Competence protein ComX; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa) |
| | truA | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa) |
| | AKZ51093.1 | 23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa) |
| | dnaI | Primosomal protein that may act to load helicase DnaC during DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa) |
| | DnaB | Helicase loader; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa) |
| | rsmG | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa) |
| | AKZ51118.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa) |
| | yhbY | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa) |
| | AKZ51125.1 | Competence protein ComX; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa) |
| | HsdR | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (992 aa) |
| | AKZ51128.1 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa) |
| | HsdM | Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa) |
| | rlmB | rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa) |
| | mrnC | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (137 aa) |
| | CysS | cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa) |
| | pnp | Polynucleotide phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (710 aa) |
| | polC | DNA polymerase III PolC; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (1465 aa) |
| | AKZ50585.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa) |
| | AKZ50587.1 | Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (67 aa) |
| | AKZ50588.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa) |
| | AKZ50590.1 | SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa) |
| | AKZ50595.1 | Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa) |
| | AKZ50596.1 | DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa) |
| | AKZ50599.1 | Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa) |
| | AKZ50606.1 | Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa) |
| | AKZ50607.1 | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa) |
| | AKZ50616.1 | Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa) |
| | AKZ50617.1 | Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa) |
| | AKZ50619.1 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa) |
| | AKZ50623.1 | Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa) |
| | dnaX | DNA polymerase III subunits gamma and tau; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa) |
| | nrdE | Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (719 aa) |
| | nrdF | Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (319 aa) |
| | AKZ50657.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa) |
| | AKZ50658.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa) |
| | AKZ51372.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (59 aa) |
| | alaS | alanine--tRNA ligase; Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (872 aa) |
| | AKZ50664.1 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa) |
| | AKZ50668.1 | 16S rRNA pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa) |
| | AKZ50676.1 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa) |
| | AKZ50678.1 | Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa) |
| | DeaD | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa) |
| | recR | Recombinase; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa) |
| | AKZ50720.1 | Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa) |
| | AKZ50721.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa) |
| | AKZ50728.1 | HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa) |
| | AKZ50729.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa) |
| | AKZ50734.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa) |
| | AKZ50735.1 | Recombinase RecT; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa) |
| | AKZ50739.1 | DNA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | AKZ50746.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (380 aa) |
| | recN | DNA recombination protein RecN; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa) |
| | xseB | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (71 aa) |
| | xseA | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (446 aa) |
| | ileS | isoleucine--tRNA ligase; IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; Derived by automated computational analysis usin [...] (933 aa) |
| | AKZ50780.1 | NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa) |
| | rlmN | Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (359 aa) |
| | rsmD | rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa) |
| | AKZ50799.1 | tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa) |
| | AKZ50810.1 | Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa) |
| | valS | valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; Derived by automated computational analysis using gene prediction method: Protein Homology. (882 aa) |
| | AKZ50816.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa) |
| | rpmE2 | Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa) |
| | AKZ50827.1 | DNAse; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa) |
| | AKZ51374.1 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa) |
| | AKZ50853.1 | HNH nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa) |
| | AKZ50854.1 | Toxin HicA; Derived by automated computational analysis using gene prediction method: Protein Homology. (61 aa) |
| | AKZ50861.1 | Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa) |
| | AKZ50865.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa) |
| | AKZ50867.1 | Recombinase RecT; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa) |
| | AKZ50871.1 | DNA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | AKZ50881.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa) |
| | asnC | asparagine--tRNA ligase; Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa) |
| | DinG | ATP-dependent DNA helicase; Unwinds DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (819 aa) |
| | queG | Epoxyqueuosine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa) |
| | AKZ50919.1 | prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (159 aa) |
| | lysS | lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa) |
| | AKZ50944.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa) |
| | AKZ50945.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa) |
| | AKZ50949.1 | Asparagine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa) |
| | smc | Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1179 aa) |
| | ProS | prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (618 aa) |
| | dtd | tyrosyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (147 aa) |
| | AKZ51191.1 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa) |
| | AKZ51196.1 | Recombinase RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa) |
| | dnaseB | Mitogenic factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa) |
| | AKZ51242.1 | Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa) |
| | nrdD | Ribonucleoside-triphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (732 aa) |
| | yrrK | Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (139 aa) |
| | recA | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (378 aa) |
| | Tag | 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa) |
| | ruvA | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (198 aa) |
| | mutL | DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa) |
| | mutS | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. (851 aa) |
| | ArgS | arginine--tRNA ligase; Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa) |
| | aspS | aspartate--tRNA ligase; Catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa) |
| | HisS | histidyl-tRNA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa) |
| | dnaB | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa) |
| | mnmG | tRNA uridine 5-carboxymethylaminomethyl modification protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (632 aa) |
| | mnmA | Thiouridylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa) |
| | recF | Recombinase RecF; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa) |
| | trpS | tryptophan--tRNA ligase; Catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa) |
| | AKZ51334.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa) |
| | rlmH | SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa) |
| | rpoE | DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. (191 aa) |
| | AKZ49828.1 | Ribonuclease J; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa) |
| | AKZ49829.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0356 family. (76 aa) |
| | tsaB | Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa) |
| | tsaD | tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (342 aa) |
| | DnaQ | 3'-5' exonuclease of DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa) |
| | DinP | DNA polymerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa) |
| | AKZ49860.1 | Ribonuclease HIII; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa) |
| | MutS2 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. (779 aa) |
| | mutY | Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa) |
| | ssb_1 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (163 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (942 aa) |
| | nusB | Antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (150 aa) |
| | AKZ49884.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa) |
| | recG | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. (671 aa) |
| | dnaJ | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (378 aa) |
| | SerS | serine--tRNA ligase; Catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa) |
| | tsaE | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa) |
| | AKZ49942.1 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa) |
| | trmB | tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (211 aa) |
| | nusA | Transcription elongation factor NusA; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa) |
| | rbfA | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (116 aa) |
| | glyQ | glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa) |
| | GlyS | glycyl-tRNA synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (679 aa) |
| | rsmH | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (316 aa) |
| | AKZ49994.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa) |
| | recU | Holliday junction resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa) |
| | AKZ50007.1 | N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa) |
| | rny | Ribonuclease; Endoribonuclease that initiates mRNA decay. (535 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (105 aa) |
| | PriA | Primosomal protein DnaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa) |
| | AKZ50019.1 | methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa) |
| | rsmB | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (440 aa) |
| | ComFA | Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa) |
| | AKZ50035.1 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa) |
| | AKZ50056.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa) |
| | AKZ50058.1 | DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa) |
| | gyrB | DNA gyrase subunit B; Negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (650 aa) |
| | AKZ50064.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2168 aa) |
| | AKZ50074.1 | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (910 aa) |
| | ligA | NAD-dependent DNA ligase LigA; This protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; Derived by automated computational analysis using gene prediction method: Protein Homology. (652 aa) |
| | pheS | phenylalanine--tRNA ligase; Catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (347 aa) |
| | PheT | phenylalanyl-tRNA synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (801 aa) |
| | AKZ50092.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | rexB | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1071 aa) |
| | addA | ATP-dependent helicase/nuclease subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (1210 aa) |
| | dnaG | DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa) |
| | rpoD | RNA polymerase sigma factor RpoD; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa) |
| | thiI | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (404 aa) |
| | AKZ50138.1 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa) |
| | pyrR | Phosphoribosyl transferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. (173 aa) |
| | rimM | 16S rRNA processing protein RimM; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa) |
| | trmD | tRNA (guanine-N1)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa) |
| | AKZ50163.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (72 aa) |
| | PapS | tRNA CCA-pyrophosphorylase; Catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa) |
| | AKZ50190.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa) |
| | Ung | uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa) |
| | gyrB-2 | DNA gyrase subunit B; Negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa) |
| | parC | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. (819 aa) |
| | rnc | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (230 aa) |
| | vicX | Metallohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa) |
| | thrS | threonyl-tRNA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa) |
| | rnr | Derived by automated computational analysis using gene prediction method: Protein Homology. (776 aa) |
| | mutM | 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (275 aa) |
| | AKZ51011.1 | DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. (158 aa) |
| | ybeY | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (165 aa) |
| | AKZ51015.1 | uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa) |
| | AKZ51043.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa) |
| | AKZ51044.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa) |
| | AKZ51046.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa) |
| | nrdE-2 | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (726 aa) |
| | nrdF-2 | Ribonucleoside-diphosphate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa) |
| | metG | methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa) |
| | xth | Exodeoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa) |
| | rsmI | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa) |
| | yabA | DNA replication initiation control protein YabA; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa) |
| | DnaX | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa) |
| | AKZ51080.1 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa) |
| | AKZ51082.1 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa) |
| | scpB | Segregation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (183 aa) |
| | scpA | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (234 aa) |
| | xerD | Recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa) |
| | AKZ51092.1 | HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa) |
| | AKZ50212.1 | Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa) |
| | miaA | tRNA delta(2)-isopentenylpyrophosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa) |
| | rnz | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (309 aa) |
| | recJ | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (736 aa) |
| | dnaD_1 | DNA replication protein DnaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (218 aa) |
| | AKZ50224.1 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | AKZ50225.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa) |
| | AKZ50230.1 | DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa) |
| | rnj | Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (553 aa) |
| | cas1 | CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (289 aa) |
| | cas2 | CRISPR-associated protein Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa) |
| | uvrC | Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa) |
| | mnmE | tRNA modification GTPase MnmE; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa) |
| | AKZ50279.1 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa) |
| | AKZ50280.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (64 aa) |
| | AKZ50281.1 | Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa) |
| | SrtI | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa) |
| | AKZ50293.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (43 aa) |
| | AKZ50294.1 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa) |
| | AKZ50295.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa) |
| | AKZ50296.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa) |
| | rluD_3 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (301 aa) |
| | Tdk2 | Thymidine kinase; Catalyzes the formation of thymidine 5'-phosphate from thymidine; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa) |
| | gyrA | DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (828 aa) |
| | AKZ50356.1 | Ribonuclease HII; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa) |
| | topA | DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (709 aa) |
| | SatD | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa) |
| | Gid | tRNA (uracil-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa) |
