(64 nodes) Host cellular component network (Peniophora sp. CONT)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A166K7S9	Uncharacterized protein. (480 aa)
	A0A165WAW3	Uncharacterized protein. (101 aa)
	A0A165WB35	Uncharacterized protein. (89 aa)
	A0A165WBA0	Uncharacterized protein. (243 aa)
	A0A165WBM3	Uncharacterized protein. (178 aa)
	A0A165WC92	Integrase catalytic domain-containing protein. (76 aa)
	A0A165WDW1	Uncharacterized protein. (88 aa)
	A0A165WH36	Uncharacterized protein. (173 aa)
	A0A165WI09	Uncharacterized protein. (72 aa)
	A0A165WI29	Uncharacterized protein. (72 aa)
	A0A165WI35	Uncharacterized protein. (146 aa)
	A0A165WI36	Uncharacterized protein. (77 aa)
	A0A165WI69	Uncharacterized protein. (351 aa)
	A0A165WK43	Uncharacterized protein. (143 aa)
	A0A165WLJ9	Uncharacterized protein. (111 aa)
	A0A165WLQ9	Uncharacterized protein. (175 aa)
	A0A165WLU2	Uncharacterized protein. (51 aa)
	A0A165WLV9	Uncharacterized protein. (213 aa)
	A0A165WRJ4	Uncharacterized protein. (148 aa)
	A0A165WST8	Uncharacterized protein. (114 aa)
	A0A165WT13	Uncharacterized protein. (103 aa)
	A0A165WTU0	Uncharacterized protein. (189 aa)
	A0A165WTV3	Uncharacterized protein. (197 aa)
	A0A165WV32	Uncharacterized protein. (115 aa)
	A0A165WVT4	Uncharacterized protein. (197 aa)
	A0A165WVU0	Uncharacterized protein. (303 aa)
	A0A165WYV9	Uncharacterized protein. (647 aa)
	A0A165WYY6	Uncharacterized protein. (124 aa)
	A0A165WZ05	Uncharacterized protein. (175 aa)
	A0A165WZU0	Uncharacterized protein. (120 aa)
	A0A165WZV2	Uncharacterized protein. (81 aa)
	A0A165WZX3	Uncharacterized protein. (96 aa)
	A0A165X006	Uncharacterized protein. (249 aa)
	A0A165X018	Uncharacterized protein. (124 aa)
	A0A165X027	CCHC-type domain-containing protein. (696 aa)
	A0A165X039	Uncharacterized protein. (67 aa)
	A0A165X0R8	Uncharacterized protein. (158 aa)
	A0A165X1E6	Uncharacterized protein. (136 aa)
	A0A165X2X3	Uncharacterized protein. (89 aa)
	A0A165X444	Uncharacterized protein. (114 aa)
	A0A165X4R2	Integrase_H2C2 domain-containing protein. (65 aa)
	A0A165X7S8	Uncharacterized protein. (55 aa)
	A0A165XBG9	Chromo domain-containing protein. (100 aa)
	A0A165XDI0	Uncharacterized protein. (50 aa)
	A0A165XI94	Uncharacterized protein. (152 aa)
	A0A165XV32	Gag_pre-integrs domain-containing protein. (79 aa)
	A0A165YGP4	Uncharacterized protein. (428 aa)
	A0A165YP10	Uncharacterized protein. (109 aa)
	A0A165ZZU9	Uncharacterized protein. (232 aa)
	A0A166AXC3	Uncharacterized protein. (108 aa)
	A0A166AXE8	Uncharacterized protein. (148 aa)
	A0A166BH20	RTP1_C1 domain-containing protein. (1044 aa)
	A0A166CMY6	Uncharacterized protein. (232 aa)
	A0A166CUH3	Uncharacterized protein. (444 aa)
	A0A166DZW8	Uncharacterized protein. (66 aa)
	A0A166DZY1	Uncharacterized protein. (99 aa)
	A0A166EZP2	Uncharacterized protein. (120 aa)
	A0A166EZR4	Uncharacterized protein. (81 aa)
	A0A166EZV1	Uncharacterized protein. (96 aa)
	A0A166FRV6	SAC domain-containing protein. (667 aa)
	A0A165WAK7	Uncharacterized protein. (398 aa)
	A0A166G3M4	Uncharacterized protein. (830 aa)
	A0A166IK27	Uncharacterized protein. (759 aa)
	A0A166IK56	Uncharacterized protein. (97 aa)

Your Current Organism:

Peniophora sp. CONT

NCBI taxonomy Id: 1314672
Other names: P. sp. CONT

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Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165WBM3	A0A165WYY6	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A165WBM3	A0A165X018	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A165WK43	A0A165ZZU9	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A165WK43	A0A166CMY6	Uncharacterized protein.	Uncharacterized protein.	0.409
A0A165WK43	A0A166CUH3	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A165WK43	A0A166G3M4	Uncharacterized protein.	Uncharacterized protein.	0.450
A0A165WTU0	A0A165WYY6	Uncharacterized protein.	Uncharacterized protein.	0.441
A0A165WTU0	A0A165X018	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A165WYY6	A0A165WBM3	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A165WYY6	A0A165WTU0	Uncharacterized protein.	Uncharacterized protein.	0.441
A0A165WZU0	A0A165X2X3	Uncharacterized protein.	Uncharacterized protein.	0.444
A0A165X018	A0A165WBM3	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A165X018	A0A165WTU0	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A165X2X3	A0A165WZU0	Uncharacterized protein.	Uncharacterized protein.	0.444
A0A165X2X3	A0A166AXE8	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A165X2X3	A0A166EZP2	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A165X444	A0A165YP10	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A165YP10	A0A165X444	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A165ZZU9	A0A165WK43	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A166AXE8	A0A165X2X3	Uncharacterized protein.	Uncharacterized protein.	0.442