(12 nodes) Mixed, incl. Tetraspanin/Peripherin, and Transmembrane receptor protein kinase activity network (Neolentinus lepideus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165MS58	Uncharacterized protein. (416 aa)
	A0A165MVX1	AA_permease domain-containing protein. (411 aa)
	A0A165NY07	Uncharacterized protein. (237 aa)
	A0A165PTG7	Membrane transporter. (490 aa)
	A0A165QN98	Kinase-like protein. (542 aa)
	A0A165QVK4	SUZ domain-containing protein. (159 aa)
	A0A165QVU7	Uncharacterized protein. (155 aa)
	A0A165QWA7	Uncharacterized protein. (198 aa)
	A0A165STT9	Kinase-like protein. (222 aa)
	A0A165T9A3	Tetraspanin Pls1 family. (230 aa)
	A0A165UC21	Carbohydrate esterase family 4 protein. (475 aa)
	A0A165UUH6	Uncharacterized protein. (263 aa)

Your Current Organism:

Neolentinus lepideus

NCBI taxonomy Id: 1314782
Other names: N. lepideus HHB14362 ss-1, Neolentinus lepideus HHB14362 ss-1

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165MS58	A0A165NY07	Uncharacterized protein.	Uncharacterized protein.	0.547
A0A165MS58	A0A165QN98	Uncharacterized protein.	Kinase-like protein.	0.637
A0A165MS58	A0A165QVK4	Uncharacterized protein.	SUZ domain-containing protein.	0.465
A0A165MS58	A0A165QWA7	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A165MS58	A0A165STT9	Uncharacterized protein.	Kinase-like protein.	0.689
A0A165MS58	A0A165UC21	Uncharacterized protein.	Carbohydrate esterase family 4 protein.	0.547
A0A165MVX1	A0A165STT9	AA_permease domain-containing protein.	Kinase-like protein.	0.611
A0A165NY07	A0A165MS58	Uncharacterized protein.	Uncharacterized protein.	0.547
A0A165NY07	A0A165STT9	Uncharacterized protein.	Kinase-like protein.	0.530
A0A165NY07	A0A165T9A3	Uncharacterized protein.	Tetraspanin Pls1 family.	0.547
A0A165NY07	A0A165UUH6	Uncharacterized protein.	Uncharacterized protein.	0.547
A0A165PTG7	A0A165QN98	Membrane transporter.	Kinase-like protein.	0.713
A0A165PTG7	A0A165STT9	Membrane transporter.	Kinase-like protein.	0.726
A0A165QN98	A0A165MS58	Kinase-like protein.	Uncharacterized protein.	0.637
A0A165QN98	A0A165PTG7	Kinase-like protein.	Membrane transporter.	0.713
A0A165QN98	A0A165QVK4	Kinase-like protein.	SUZ domain-containing protein.	0.666
A0A165QN98	A0A165QWA7	Kinase-like protein.	Uncharacterized protein.	0.666
A0A165QN98	A0A165STT9	Kinase-like protein.	Kinase-like protein.	0.691
A0A165QN98	A0A165T9A3	Kinase-like protein.	Tetraspanin Pls1 family.	0.637
A0A165QN98	A0A165UUH6	Kinase-like protein.	Uncharacterized protein.	0.637