(5 nodes) SNARE network (Neolentinus lepideus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165RV48	V-snare-domain-containing protein. (225 aa)
	A0A165SVN4	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	A0A165T117	Vesicle-associated membrane protein; Belongs to the synaptobrevin family. (223 aa)
	A0A165TJ03	t-SNARE; Belongs to the syntaxin family. (371 aa)
	A0A165UWJ1	t-SNARE; Belongs to the syntaxin family. (270 aa)

Your Current Organism:

Neolentinus lepideus

NCBI taxonomy Id: 1314782
Other names: N. lepideus HHB14362 ss-1, Neolentinus lepideus HHB14362 ss-1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165RV48	A0A165SVN4	V-snare-domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.999
A0A165RV48	A0A165T117	V-snare-domain-containing protein.	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	0.919
A0A165RV48	A0A165TJ03	V-snare-domain-containing protein.	t-SNARE; Belongs to the syntaxin family.	0.999
A0A165RV48	A0A165UWJ1	V-snare-domain-containing protein.	t-SNARE; Belongs to the syntaxin family.	0.994
A0A165SVN4	A0A165RV48	t-SNARE coiled-coil homology domain-containing protein.	V-snare-domain-containing protein.	0.999
A0A165SVN4	A0A165T117	t-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	0.694
A0A165SVN4	A0A165TJ03	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE; Belongs to the syntaxin family.	0.998
A0A165SVN4	A0A165UWJ1	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE; Belongs to the syntaxin family.	0.968
A0A165T117	A0A165RV48	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	V-snare-domain-containing protein.	0.919
A0A165T117	A0A165SVN4	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	t-SNARE coiled-coil homology domain-containing protein.	0.694
A0A165T117	A0A165TJ03	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	t-SNARE; Belongs to the syntaxin family.	0.865
A0A165T117	A0A165UWJ1	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	t-SNARE; Belongs to the syntaxin family.	0.983
A0A165TJ03	A0A165RV48	t-SNARE; Belongs to the syntaxin family.	V-snare-domain-containing protein.	0.999
A0A165TJ03	A0A165SVN4	t-SNARE; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.998
A0A165TJ03	A0A165T117	t-SNARE; Belongs to the syntaxin family.	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	0.865
A0A165TJ03	A0A165UWJ1	t-SNARE; Belongs to the syntaxin family.	t-SNARE; Belongs to the syntaxin family.	0.699
A0A165UWJ1	A0A165RV48	t-SNARE; Belongs to the syntaxin family.	V-snare-domain-containing protein.	0.994
A0A165UWJ1	A0A165SVN4	t-SNARE; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.968
A0A165UWJ1	A0A165T117	t-SNARE; Belongs to the syntaxin family.	Vesicle-associated membrane protein; Belongs to the synaptobrevin family.	0.983
A0A165UWJ1	A0A165TJ03	t-SNARE; Belongs to the syntaxin family.	t-SNARE; Belongs to the syntaxin family.	0.699