(28 nodes) Oxidoreduction-driven active transmembrane transporter activity network (Neolentinus lepideus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165TQF1	Ubiquinol-cytochrome C reductase. (65 aa)
	A0A165MJZ7	Uncharacterized protein. (184 aa)
	A0A165N2B5	F-box domain-containing protein. (502 aa)
	A0A165N2K0	F-box domain-containing protein. (505 aa)
	A0A165N9K9	NDUFA2, NADH ubiquinone oxidoreductase 10.5kD subunit. (93 aa)
	A0A165NA88	F420H2 dehydrogenase; Belongs to the complex I 30 kDa subunit family. (273 aa)
	A0A165NSC8	Uncharacterized protein. (245 aa)
	A0A165NTG8	Cytochrome c oxidase subunit 7A; This small integral protein plays a role in holoenzyme assembly or stability. (60 aa)
	A0A165P1L7	Mitochondrial carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (608 aa)
	A0A165PML1	Uncharacterized protein. (80 aa)
	A0A165PS59	NADH-ubiquinone oxidoreductase 20 kDa subunit; Belongs to the complex I 20 kDa subunit family. (233 aa)
	A0A165PS65	Uncharacterized protein. (1038 aa)
	A0A165QDI7	Uncharacterized protein. (102 aa)
	A0A165QWY4	NdufA6 NADH-ubiquinone oxidoreductase 14.8 kDa subunit; Belongs to the complex I LYR family. (138 aa)
	A0A165RG96	Ubiquinol-cytochrome c r. (282 aa)
	A0A165S2G5	NDUFB9, NADH-ubiquinone oxidoreductase; Belongs to the complex I LYR family. (108 aa)
	A0A165S2X1	Ndufs8, NADH:ubiquinone oxidoreductase 23 kd subunit. (243 aa)
	A0A165T330	NADH-ubiquinone oxidoreductase 75kD subunit; Belongs to the complex I 75 kDa subunit family. (742 aa)
	A0A165TQL0	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (140 aa)
	A0A165U7J8	Cytochrome c domain-containing protein. (333 aa)
	A0A165U945	Uncharacterized protein. (167 aa)
	A0A165URC0	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (126 aa)
	A0A165V0P2	Pyrid_ox_like domain-containing protein. (205 aa)
	A0A165V1C4	Uncharacterized protein. (66 aa)
	A0A165W2R6	zf-CHCC domain-containing protein. (147 aa)
	A0A165W3F2	Mitochondrial cytochrome c oxidase subunit VIa; Belongs to the cytochrome c oxidase subunit 6A family. (130 aa)
	A0A165W3U4	Uncharacterized protein. (172 aa)
	A0A165WCK9	Ndufs2, NADH:ubiquinone oxidoreductase 49 kd subunit; Belongs to the complex I 49 kDa subunit family. (456 aa)

Your Current Organism:

Neolentinus lepideus

NCBI taxonomy Id: 1314782
Other names: N. lepideus HHB14362 ss-1, Neolentinus lepideus HHB14362 ss-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165MJZ7	A0A165N2B5	Uncharacterized protein.	F-box domain-containing protein.	0.982
A0A165MJZ7	A0A165N2K0	Uncharacterized protein.	F-box domain-containing protein.	0.982
A0A165MJZ7	A0A165N9K9	Uncharacterized protein.	NDUFA2, NADH ubiquinone oxidoreductase 10.5kD subunit.	0.999
A0A165MJZ7	A0A165NA88	Uncharacterized protein.	F420H2 dehydrogenase; Belongs to the complex I 30 kDa subunit family.	0.999
A0A165MJZ7	A0A165NSC8	Uncharacterized protein.	Uncharacterized protein.	0.879
A0A165MJZ7	A0A165P1L7	Uncharacterized protein.	Mitochondrial carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.940
A0A165MJZ7	A0A165PML1	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A165MJZ7	A0A165PS59	Uncharacterized protein.	NADH-ubiquinone oxidoreductase 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.	0.990
A0A165MJZ7	A0A165PS65	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A165MJZ7	A0A165QDI7	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A165MJZ7	A0A165QWY4	Uncharacterized protein.	NdufA6 NADH-ubiquinone oxidoreductase 14.8 kDa subunit; Belongs to the complex I LYR family.	0.999
A0A165MJZ7	A0A165RG96	Uncharacterized protein.	Ubiquinol-cytochrome c r.	0.998
A0A165MJZ7	A0A165S2G5	Uncharacterized protein.	NDUFB9, NADH-ubiquinone oxidoreductase; Belongs to the complex I LYR family.	0.999
A0A165MJZ7	A0A165S2X1	Uncharacterized protein.	Ndufs8, NADH:ubiquinone oxidoreductase 23 kd subunit.	0.999
A0A165MJZ7	A0A165T330	Uncharacterized protein.	NADH-ubiquinone oxidoreductase 75kD subunit; Belongs to the complex I 75 kDa subunit family.	0.999
A0A165MJZ7	A0A165TQF1	Uncharacterized protein.	Ubiquinol-cytochrome C reductase.	0.991
A0A165MJZ7	A0A165TQL0	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
A0A165MJZ7	A0A165U7J8	Uncharacterized protein.	Cytochrome c domain-containing protein.	0.997
A0A165MJZ7	A0A165U945	Uncharacterized protein.	Uncharacterized protein.	0.974
A0A165MJZ7	A0A165URC0	Uncharacterized protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.997