(13 nodes) Cytochrome b5, heme-binding site network (Neolentinus lepideus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165MFM6	Acyl-CoA dehydrogenase NM domain-like protein. (519 aa)
	A0A165NLH5	Acyl-CoA dehydrogenase NM domain-like protein. (540 aa)
	A0A165P7G8	Cytochrome b5 heme-binding domain-containing protein. (442 aa)
	A0A165PI07	Uncharacterized protein. (508 aa)
	A0A165QQU4	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. (493 aa)
	A0A165QYV1	Cytochrome b5; Belongs to the cytochrome b5 family. (231 aa)
	A0A165W772	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates; Belongs to the fatty acid desaturase type 1 family. (422 aa)
	A0A165VW83	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (904 aa)
	A0A165RS40	Fumarate reductase; Irreversibly catalyzes the reduction of fumarate to succinate. (578 aa)
	A0A165TRG5	Acyl-CoA dehydrogenase NM domain-like protein. (518 aa)
	A0A165UG62	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. (369 aa)
	A0A165VAF8	Cytochrome b5; Belongs to the cytochrome b5 family. (128 aa)
	A0A165W1N4	Uncharacterized protein; Belongs to the cytochrome b5 family. (496 aa)

Your Current Organism:

Neolentinus lepideus

NCBI taxonomy Id: 1314782
Other names: N. lepideus HHB14362 ss-1, Neolentinus lepideus HHB14362 ss-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165MFM6	A0A165NLH5	Acyl-CoA dehydrogenase NM domain-like protein.	Acyl-CoA dehydrogenase NM domain-like protein.	0.419
A0A165MFM6	A0A165VW83	Acyl-CoA dehydrogenase NM domain-like protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.755
A0A165NLH5	A0A165MFM6	Acyl-CoA dehydrogenase NM domain-like protein.	Acyl-CoA dehydrogenase NM domain-like protein.	0.419
A0A165NLH5	A0A165TRG5	Acyl-CoA dehydrogenase NM domain-like protein.	Acyl-CoA dehydrogenase NM domain-like protein.	0.423
A0A165NLH5	A0A165VW83	Acyl-CoA dehydrogenase NM domain-like protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.752
A0A165P7G8	A0A165PI07	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.753
A0A165P7G8	A0A165QQU4	Cytochrome b5 heme-binding domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.811
A0A165P7G8	A0A165QYV1	Cytochrome b5 heme-binding domain-containing protein.	Cytochrome b5; Belongs to the cytochrome b5 family.	0.596
A0A165P7G8	A0A165UG62	Cytochrome b5 heme-binding domain-containing protein.	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.	0.717
A0A165P7G8	A0A165VAF8	Cytochrome b5 heme-binding domain-containing protein.	Cytochrome b5; Belongs to the cytochrome b5 family.	0.460
A0A165P7G8	A0A165VW83	Cytochrome b5 heme-binding domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.918
A0A165P7G8	A0A165W1N4	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.857
A0A165P7G8	A0A165W772	Cytochrome b5 heme-binding domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates; Belongs to the fatty acid desaturase type 1 family.	0.827
A0A165PI07	A0A165P7G8	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.753
A0A165PI07	A0A165QQU4	Uncharacterized protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.753
A0A165PI07	A0A165UG62	Uncharacterized protein.	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.	0.495
A0A165PI07	A0A165VW83	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.901
A0A165PI07	A0A165W1N4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.871
A0A165PI07	A0A165W772	Uncharacterized protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates; Belongs to the fatty acid desaturase type 1 family.	0.753
A0A165QQU4	A0A165P7G8	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Cytochrome b5 heme-binding domain-containing protein.	0.811